Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Upk3aQ9JKX8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Upk3aQ9JKX8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Upk3aQ9JKX8 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Upk3aQ9JKX8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Upk3aQ9JKX8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Upk3aQ9JKX8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.97■□□□□ 0.95
Upk3aQ9JKX8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.97■□□□□ 0.95
Upk3aQ9JKX8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Upk3aQ9JKX8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Upk3aQ9JKX8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Upk3aQ9JKX8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.96■□□□□ 0.95
Upk3aQ9JKX8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Upk3aQ9JKX8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Upk3aQ9JKX8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Upk3aQ9JKX8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.96■□□□□ 0.95
Upk3aQ9JKX8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Upk3aQ9JKX8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.95■□□□□ 0.94
Upk3aQ9JKX8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Upk3aQ9JKX8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.95■□□□□ 0.94
Upk3aQ9JKX8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Upk3aQ9JKX8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Upk3aQ9JKX8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.95■□□□□ 0.94
Upk3aQ9JKX8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Upk3aQ9JKX8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Upk3aQ9JKX8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Upk3aQ9JKX8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Upk3aQ9JKX8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.94■□□□□ 0.94
Upk3aQ9JKX8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Upk3aQ9JKX8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
Upk3aQ9JKX8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Upk3aQ9JKX8 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Upk3aQ9JKX8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Upk3aQ9JKX8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Upk3aQ9JKX8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Upk3aQ9JKX8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.93■□□□□ 0.94
Upk3aQ9JKX8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Upk3aQ9JKX8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Upk3aQ9JKX8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.93■□□□□ 0.94
Upk3aQ9JKX8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Upk3aQ9JKX8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Upk3aQ9JKX8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Upk3aQ9JKX8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.92■□□□□ 0.94
Upk3aQ9JKX8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Upk3aQ9JKX8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Upk3aQ9JKX8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Upk3aQ9JKX8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Upk3aQ9JKX8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Upk3aQ9JKX8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Upk3aQ9JKX8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Upk3aQ9JKX8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.91■□□□□ 0.94
Upk3aQ9JKX8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Upk3aQ9JKX8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Upk3aQ9JKX8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.9■□□□□ 0.94
Upk3aQ9JKX8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Upk3aQ9JKX8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Upk3aQ9JKX8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Upk3aQ9JKX8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Upk3aQ9JKX8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Upk3aQ9JKX8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.94
Upk3aQ9JKX8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Upk3aQ9JKX8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Upk3aQ9JKX8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.89■□□□□ 0.93
Upk3aQ9JKX8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.89■□□□□ 0.93
Upk3aQ9JKX8 Gm5921-201ENSMUST00000075898 882 ntBASIC20.89■□□□□ 0.93
Upk3aQ9JKX8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Upk3aQ9JKX8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Upk3aQ9JKX8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Upk3aQ9JKX8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.88■□□□□ 0.93
Upk3aQ9JKX8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Upk3aQ9JKX8 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.88■□□□□ 0.93
Upk3aQ9JKX8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.88■□□□□ 0.93
Upk3aQ9JKX8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
Upk3aQ9JKX8 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.87■□□□□ 0.93
Upk3aQ9JKX8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Upk3aQ9JKX8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Upk3aQ9JKX8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Upk3aQ9JKX8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Upk3aQ9JKX8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Upk3aQ9JKX8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Upk3aQ9JKX8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Upk3aQ9JKX8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Upk3aQ9JKX8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Upk3aQ9JKX8 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Upk3aQ9JKX8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Upk3aQ9JKX8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.86■□□□□ 0.93
Upk3aQ9JKX8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.86■□□□□ 0.93
Upk3aQ9JKX8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Upk3aQ9JKX8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Upk3aQ9JKX8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.85■□□□□ 0.93
Upk3aQ9JKX8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.85■□□□□ 0.93
Upk3aQ9JKX8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Upk3aQ9JKX8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Upk3aQ9JKX8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Upk3aQ9JKX8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Upk3aQ9JKX8 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Upk3aQ9JKX8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.85■□□□□ 0.93
Upk3aQ9JKX8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Upk3aQ9JKX8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.84■□□□□ 0.93
Upk3aQ9JKX8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms