Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rhox4bQ9JI43 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Rhox4bQ9JI43 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rhox4bQ9JI43 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Rhox4bQ9JI43 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.31■□□□□ 0.36
Rhox4bQ9JI43 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
Rhox4bQ9JI43 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.31■□□□□ 0.36
Rhox4bQ9JI43 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rhox4bQ9JI43 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.31■□□□□ 0.36
Rhox4bQ9JI43 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rhox4bQ9JI43 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rhox4bQ9JI43 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rhox4bQ9JI43 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.3■□□□□ 0.36
Rhox4bQ9JI43 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rhox4bQ9JI43 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rhox4bQ9JI43 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rhox4bQ9JI43 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rhox4bQ9JI43 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rhox4bQ9JI43 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rhox4bQ9JI43 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rhox4bQ9JI43 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rhox4bQ9JI43 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rhox4bQ9JI43 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rhox4bQ9JI43 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rhox4bQ9JI43 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rhox4bQ9JI43 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rhox4bQ9JI43 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rhox4bQ9JI43 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rhox4bQ9JI43 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rhox4bQ9JI43 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.27■□□□□ 0.36
Rhox4bQ9JI43 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.27■□□□□ 0.35
Rhox4bQ9JI43 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.26■□□□□ 0.35
Rhox4bQ9JI43 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rhox4bQ9JI43 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rhox4bQ9JI43 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rhox4bQ9JI43 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rhox4bQ9JI43 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.26■□□□□ 0.35
Rhox4bQ9JI43 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rhox4bQ9JI43 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rhox4bQ9JI43 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rhox4bQ9JI43 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rhox4bQ9JI43 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rhox4bQ9JI43 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.26■□□□□ 0.35
Rhox4bQ9JI43 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rhox4bQ9JI43 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rhox4bQ9JI43 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rhox4bQ9JI43 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rhox4bQ9JI43 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rhox4bQ9JI43 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rhox4bQ9JI43 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rhox4bQ9JI43 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rhox4bQ9JI43 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rhox4bQ9JI43 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.24■□□□□ 0.35
Rhox4bQ9JI43 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rhox4bQ9JI43 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rhox4bQ9JI43 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rhox4bQ9JI43 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rhox4bQ9JI43 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rhox4bQ9JI43 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rhox4bQ9JI43 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rhox4bQ9JI43 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rhox4bQ9JI43 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rhox4bQ9JI43 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rhox4bQ9JI43 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rhox4bQ9JI43 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rhox4bQ9JI43 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.21■□□□□ 0.35
Rhox4bQ9JI43 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rhox4bQ9JI43 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rhox4bQ9JI43 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rhox4bQ9JI43 Gm37136-201ENSMUST00000194368 194 ntBASIC17.21■□□□□ 0.35
Rhox4bQ9JI43 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rhox4bQ9JI43 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rhox4bQ9JI43 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rhox4bQ9JI43 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rhox4bQ9JI43 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Rhox4bQ9JI43 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rhox4bQ9JI43 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rhox4bQ9JI43 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
Rhox4bQ9JI43 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rhox4bQ9JI43 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.19■□□□□ 0.34
Rhox4bQ9JI43 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rhox4bQ9JI43 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rhox4bQ9JI43 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rhox4bQ9JI43 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rhox4bQ9JI43 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rhox4bQ9JI43 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rhox4bQ9JI43 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rhox4bQ9JI43 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rhox4bQ9JI43 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rhox4bQ9JI43 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rhox4bQ9JI43 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Rhox4bQ9JI43 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Rhox4bQ9JI43 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rhox4bQ9JI43 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rhox4bQ9JI43 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
Rhox4bQ9JI43 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rhox4bQ9JI43 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rhox4bQ9JI43 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rhox4bQ9JI43 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rhox4bQ9JI43 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 242.2 ms