Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfrsf13bQ9ET35 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.02■□□□□ 0.32
Tnfrsf13bQ9ET35 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tnfrsf13bQ9ET35 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Tnfrsf13bQ9ET35 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tnfrsf13bQ9ET35 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.02■□□□□ 0.31
Tnfrsf13bQ9ET35 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
Tnfrsf13bQ9ET35 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Tnfrsf13bQ9ET35 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfrsf13bQ9ET35 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.01■□□□□ 0.31
Tnfrsf13bQ9ET35 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfrsf13bQ9ET35 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.01■□□□□ 0.31
Tnfrsf13bQ9ET35 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfrsf13bQ9ET35 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfrsf13bQ9ET35 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17■□□□□ 0.31
Tnfrsf13bQ9ET35 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17■□□□□ 0.31
Tnfrsf13bQ9ET35 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17■□□□□ 0.31
Tnfrsf13bQ9ET35 Gm45364-201ENSMUST00000210883 159 ntBASIC17■□□□□ 0.31
Tnfrsf13bQ9ET35 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfrsf13bQ9ET35 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Tnfrsf13bQ9ET35 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfrsf13bQ9ET35 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfrsf13bQ9ET35 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Tnfrsf13bQ9ET35 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfrsf13bQ9ET35 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Tnfrsf13bQ9ET35 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.99■□□□□ 0.31
Tnfrsf13bQ9ET35 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Tnfrsf13bQ9ET35 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfrsf13bQ9ET35 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfrsf13bQ9ET35 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfrsf13bQ9ET35 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfrsf13bQ9ET35 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfrsf13bQ9ET35 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfrsf13bQ9ET35 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfrsf13bQ9ET35 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf13bQ9ET35 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf13bQ9ET35 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf13bQ9ET35 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf13bQ9ET35 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf13bQ9ET35 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Tnfrsf13bQ9ET35 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf13bQ9ET35 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfrsf13bQ9ET35 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfrsf13bQ9ET35 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.96■□□□□ 0.31
Tnfrsf13bQ9ET35 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfrsf13bQ9ET35 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Tnfrsf13bQ9ET35 Gm8503-201ENSMUST00000118131 455 ntBASIC16.96■□□□□ 0.31
Tnfrsf13bQ9ET35 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC16.96■□□□□ 0.31
Tnfrsf13bQ9ET35 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC16.96■□□□□ 0.31
Tnfrsf13bQ9ET35 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC16.96■□□□□ 0.31
Tnfrsf13bQ9ET35 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Tnfrsf13bQ9ET35 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfrsf13bQ9ET35 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Tnfrsf13bQ9ET35 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Tnfrsf13bQ9ET35 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Tnfrsf13bQ9ET35 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Tnfrsf13bQ9ET35 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfrsf13bQ9ET35 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfrsf13bQ9ET35 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfrsf13bQ9ET35 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.95■□□□□ 0.3
Tnfrsf13bQ9ET35 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfrsf13bQ9ET35 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfrsf13bQ9ET35 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.95■□□□□ 0.3
Tnfrsf13bQ9ET35 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Tnfrsf13bQ9ET35 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Tnfrsf13bQ9ET35 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf13bQ9ET35 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf13bQ9ET35 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.93■□□□□ 0.3
Tnfrsf13bQ9ET35 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf13bQ9ET35 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf13bQ9ET35 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf13bQ9ET35 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf13bQ9ET35 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf13bQ9ET35 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Tnfrsf13bQ9ET35 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf13bQ9ET35 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf13bQ9ET35 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf13bQ9ET35 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Tnfrsf13bQ9ET35 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf13bQ9ET35 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf13bQ9ET35 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf13bQ9ET35 Notumos-201ENSMUST00000151998 2659 ntBASIC16.91■□□□□ 0.3
Tnfrsf13bQ9ET35 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Tnfrsf13bQ9ET35 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf13bQ9ET35 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf13bQ9ET35 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Tnfrsf13bQ9ET35 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf13bQ9ET35 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf13bQ9ET35 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf13bQ9ET35 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf13bQ9ET35 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf13bQ9ET35 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf13bQ9ET35 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Tnfrsf13bQ9ET35 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf13bQ9ET35 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf13bQ9ET35 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf13bQ9ET35 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf13bQ9ET35 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Tnfrsf13bQ9ET35 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Tnfrsf13bQ9ET35 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms