Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.66■□□□□ 0.9
Ube4bQ9ES00 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.66■□□□□ 0.9
Ube4bQ9ES00 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.66■□□□□ 0.9
Ube4bQ9ES00 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ube4bQ9ES00 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ube4bQ9ES00 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ube4bQ9ES00 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ube4bQ9ES00 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ube4bQ9ES00 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.65■□□□□ 0.9
Ube4bQ9ES00 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ube4bQ9ES00 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ube4bQ9ES00 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ube4bQ9ES00 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ube4bQ9ES00 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Ube4bQ9ES00 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Ube4bQ9ES00 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
Ube4bQ9ES00 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.64■□□□□ 0.89
Ube4bQ9ES00 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ube4bQ9ES00 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ube4bQ9ES00 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ube4bQ9ES00 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ube4bQ9ES00 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ube4bQ9ES00 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ube4bQ9ES00 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ube4bQ9ES00 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ube4bQ9ES00 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ube4bQ9ES00 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ube4bQ9ES00 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ube4bQ9ES00 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ube4bQ9ES00 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ube4bQ9ES00 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ube4bQ9ES00 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Ube4bQ9ES00 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ube4bQ9ES00 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ube4bQ9ES00 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ube4bQ9ES00 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ube4bQ9ES00 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ube4bQ9ES00 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ube4bQ9ES00 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ube4bQ9ES00 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.6■□□□□ 0.89
Ube4bQ9ES00 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
Ube4bQ9ES00 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ube4bQ9ES00 Nkain2-201ENSMUST00000092602 558 ntBASIC20.6■□□□□ 0.89
Ube4bQ9ES00 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ube4bQ9ES00 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ube4bQ9ES00 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ube4bQ9ES00 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ube4bQ9ES00 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ube4bQ9ES00 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ube4bQ9ES00 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ube4bQ9ES00 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ube4bQ9ES00 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ube4bQ9ES00 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ube4bQ9ES00 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ube4bQ9ES00 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ube4bQ9ES00 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ube4bQ9ES00 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.58■□□□□ 0.89
Ube4bQ9ES00 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.58■□□□□ 0.88
Ube4bQ9ES00 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Ube4bQ9ES00 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ube4bQ9ES00 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ube4bQ9ES00 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ube4bQ9ES00 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ube4bQ9ES00 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ube4bQ9ES00 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ube4bQ9ES00 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ube4bQ9ES00 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ube4bQ9ES00 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ube4bQ9ES00 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ube4bQ9ES00 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ube4bQ9ES00 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ube4bQ9ES00 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ube4bQ9ES00 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ube4bQ9ES00 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ube4bQ9ES00 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.56■□□□□ 0.88
Ube4bQ9ES00 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ube4bQ9ES00 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ube4bQ9ES00 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Ube4bQ9ES00 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.55■□□□□ 0.88
Ube4bQ9ES00 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ube4bQ9ES00 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ube4bQ9ES00 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ube4bQ9ES00 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ube4bQ9ES00 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ube4bQ9ES00 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ube4bQ9ES00 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.54■□□□□ 0.88
Ube4bQ9ES00 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ube4bQ9ES00 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.54■□□□□ 0.88
Ube4bQ9ES00 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ube4bQ9ES00 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Ube4bQ9ES00 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ube4bQ9ES00 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.53■□□□□ 0.88
Ube4bQ9ES00 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ube4bQ9ES00 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ube4bQ9ES00 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ube4bQ9ES00 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.53■□□□□ 0.88
Ube4bQ9ES00 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ube4bQ9ES00 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ube4bQ9ES00 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ube4bQ9ES00 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 112.5 ms