Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Rtp4Q9ER80 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.19■□□□□ 0.82
Rtp4Q9ER80 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtp4Q9ER80 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtp4Q9ER80 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rtp4Q9ER80 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rtp4Q9ER80 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtp4Q9ER80 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.18■□□□□ 0.82
Rtp4Q9ER80 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.18■□□□□ 0.82
Rtp4Q9ER80 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtp4Q9ER80 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtp4Q9ER80 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtp4Q9ER80 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtp4Q9ER80 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Rtp4Q9ER80 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtp4Q9ER80 Gm15546-201ENSMUST00000122095 826 ntBASIC20.17■□□□□ 0.82
Rtp4Q9ER80 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtp4Q9ER80 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Rtp4Q9ER80 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rtp4Q9ER80 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtp4Q9ER80 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rtp4Q9ER80 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rtp4Q9ER80 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Rtp4Q9ER80 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtp4Q9ER80 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.15■□□□□ 0.82
Rtp4Q9ER80 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtp4Q9ER80 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rtp4Q9ER80 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtp4Q9ER80 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtp4Q9ER80 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.15■□□□□ 0.82
Rtp4Q9ER80 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rtp4Q9ER80 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtp4Q9ER80 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtp4Q9ER80 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rtp4Q9ER80 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtp4Q9ER80 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rtp4Q9ER80 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtp4Q9ER80 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtp4Q9ER80 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Rtp4Q9ER80 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtp4Q9ER80 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.13■□□□□ 0.81
Rtp4Q9ER80 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.13■□□□□ 0.81
Rtp4Q9ER80 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.13■□□□□ 0.81
Rtp4Q9ER80 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.13■□□□□ 0.81
Rtp4Q9ER80 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtp4Q9ER80 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rtp4Q9ER80 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtp4Q9ER80 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtp4Q9ER80 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtp4Q9ER80 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtp4Q9ER80 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.12■□□□□ 0.81
Rtp4Q9ER80 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.12■□□□□ 0.81
Rtp4Q9ER80 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtp4Q9ER80 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtp4Q9ER80 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Rtp4Q9ER80 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtp4Q9ER80 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Rtp4Q9ER80 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rtp4Q9ER80 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Rtp4Q9ER80 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtp4Q9ER80 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.11■□□□□ 0.81
Rtp4Q9ER80 Gm43566-201ENSMUST00000196851 808 ntBASIC20.11■□□□□ 0.81
Rtp4Q9ER80 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtp4Q9ER80 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtp4Q9ER80 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtp4Q9ER80 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rtp4Q9ER80 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rtp4Q9ER80 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.1■□□□□ 0.81
Rtp4Q9ER80 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rtp4Q9ER80 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rtp4Q9ER80 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.1■□□□□ 0.81
Rtp4Q9ER80 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtp4Q9ER80 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtp4Q9ER80 Gm45444-201ENSMUST00000211394 898 ntBASIC20.09■□□□□ 0.81
Rtp4Q9ER80 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.09■□□□□ 0.81
Rtp4Q9ER80 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.09■□□□□ 0.81
Rtp4Q9ER80 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Rtp4Q9ER80 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rtp4Q9ER80 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rtp4Q9ER80 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.08■□□□□ 0.81
Rtp4Q9ER80 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rtp4Q9ER80 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Rtp4Q9ER80 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Rtp4Q9ER80 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rtp4Q9ER80 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Rtp4Q9ER80 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.07■□□□□ 0.8
Rtp4Q9ER80 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Rtp4Q9ER80 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.07■□□□□ 0.8
Rtp4Q9ER80 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rtp4Q9ER80 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rtp4Q9ER80 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rtp4Q9ER80 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rtp4Q9ER80 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtp4Q9ER80 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rtp4Q9ER80 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.06■□□□□ 0.8
Rtp4Q9ER80 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtp4Q9ER80 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtp4Q9ER80 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtp4Q9ER80 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtp4Q9ER80 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms