Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssr3Q9DCF9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ssr3Q9DCF9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssr3Q9DCF9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssr3Q9DCF9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ssr3Q9DCF9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssr3Q9DCF9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.26■□□□□ 0.67
Ssr3Q9DCF9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssr3Q9DCF9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssr3Q9DCF9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssr3Q9DCF9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssr3Q9DCF9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssr3Q9DCF9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssr3Q9DCF9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ssr3Q9DCF9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssr3Q9DCF9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ssr3Q9DCF9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssr3Q9DCF9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.25■□□□□ 0.67
Ssr3Q9DCF9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ssr3Q9DCF9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.24■□□□□ 0.67
Ssr3Q9DCF9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssr3Q9DCF9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Ssr3Q9DCF9 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ssr3Q9DCF9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssr3Q9DCF9 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.24■□□□□ 0.67
Ssr3Q9DCF9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssr3Q9DCF9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ssr3Q9DCF9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssr3Q9DCF9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssr3Q9DCF9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.22■□□□□ 0.67
Ssr3Q9DCF9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssr3Q9DCF9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ssr3Q9DCF9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ssr3Q9DCF9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ssr3Q9DCF9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
Ssr3Q9DCF9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ssr3Q9DCF9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.22■□□□□ 0.67
Ssr3Q9DCF9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssr3Q9DCF9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssr3Q9DCF9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ssr3Q9DCF9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssr3Q9DCF9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssr3Q9DCF9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ssr3Q9DCF9 Gm22567-201ENSMUST00000175542 342 ntBASIC19.21■□□□□ 0.67
Ssr3Q9DCF9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.21■□□□□ 0.67
Ssr3Q9DCF9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssr3Q9DCF9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ssr3Q9DCF9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.21■□□□□ 0.67
Ssr3Q9DCF9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssr3Q9DCF9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssr3Q9DCF9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Ssr3Q9DCF9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ssr3Q9DCF9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssr3Q9DCF9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssr3Q9DCF9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssr3Q9DCF9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssr3Q9DCF9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssr3Q9DCF9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssr3Q9DCF9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssr3Q9DCF9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssr3Q9DCF9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssr3Q9DCF9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssr3Q9DCF9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssr3Q9DCF9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssr3Q9DCF9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ssr3Q9DCF9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.19■□□□□ 0.66
Ssr3Q9DCF9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ssr3Q9DCF9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ssr3Q9DCF9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssr3Q9DCF9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssr3Q9DCF9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssr3Q9DCF9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssr3Q9DCF9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssr3Q9DCF9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssr3Q9DCF9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssr3Q9DCF9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ssr3Q9DCF9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Ssr3Q9DCF9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssr3Q9DCF9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.17■□□□□ 0.66
Ssr3Q9DCF9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Ssr3Q9DCF9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssr3Q9DCF9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ssr3Q9DCF9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ssr3Q9DCF9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssr3Q9DCF9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ssr3Q9DCF9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssr3Q9DCF9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssr3Q9DCF9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssr3Q9DCF9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssr3Q9DCF9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssr3Q9DCF9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ssr3Q9DCF9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ssr3Q9DCF9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssr3Q9DCF9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssr3Q9DCF9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssr3Q9DCF9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssr3Q9DCF9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssr3Q9DCF9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ssr3Q9DCF9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssr3Q9DCF9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms