Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rnf135Q9CWS1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.46■■□□□ 1.19
Rnf135Q9CWS1 Gm27502-201ENSMUST00000183495 199 ntBASIC22.46■■□□□ 1.19
Rnf135Q9CWS1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rnf135Q9CWS1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rnf135Q9CWS1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Rnf135Q9CWS1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Rnf135Q9CWS1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.45■■□□□ 1.18
Rnf135Q9CWS1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.45■■□□□ 1.18
Rnf135Q9CWS1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.45■■□□□ 1.18
Rnf135Q9CWS1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rnf135Q9CWS1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Rnf135Q9CWS1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rnf135Q9CWS1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rnf135Q9CWS1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Rnf135Q9CWS1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Rnf135Q9CWS1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rnf135Q9CWS1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rnf135Q9CWS1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rnf135Q9CWS1 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rnf135Q9CWS1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Rnf135Q9CWS1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rnf135Q9CWS1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rnf135Q9CWS1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rnf135Q9CWS1 Gm6277-202ENSMUST00000224036 2779 ntBASIC22.42■■□□□ 1.18
Rnf135Q9CWS1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Rnf135Q9CWS1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rnf135Q9CWS1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rnf135Q9CWS1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC22.41■■□□□ 1.18
Rnf135Q9CWS1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Rnf135Q9CWS1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rnf135Q9CWS1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.41■■□□□ 1.18
Rnf135Q9CWS1 Gm44428-201ENSMUST00000204474 874 ntBASIC22.41■■□□□ 1.18
Rnf135Q9CWS1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rnf135Q9CWS1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rnf135Q9CWS1 Gm13042-201ENSMUST00000119244 1955 ntBASIC22.41■■□□□ 1.18
Rnf135Q9CWS1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rnf135Q9CWS1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rnf135Q9CWS1 Gm32051-202ENSMUST00000197905 2385 ntBASIC22.4■■□□□ 1.18
Rnf135Q9CWS1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.4■■□□□ 1.18
Rnf135Q9CWS1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rnf135Q9CWS1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rnf135Q9CWS1 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Rnf135Q9CWS1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.39■■□□□ 1.18
Rnf135Q9CWS1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rnf135Q9CWS1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Rnf135Q9CWS1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Rnf135Q9CWS1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Rnf135Q9CWS1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC22.38■■□□□ 1.17
Rnf135Q9CWS1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rnf135Q9CWS1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Rnf135Q9CWS1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Rnf135Q9CWS1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rnf135Q9CWS1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Rnf135Q9CWS1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rnf135Q9CWS1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rnf135Q9CWS1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rnf135Q9CWS1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rnf135Q9CWS1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Rnf135Q9CWS1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Rnf135Q9CWS1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rnf135Q9CWS1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rnf135Q9CWS1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rnf135Q9CWS1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.36■■□□□ 1.17
Rnf135Q9CWS1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rnf135Q9CWS1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC22.36■■□□□ 1.17
Rnf135Q9CWS1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rnf135Q9CWS1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rnf135Q9CWS1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rnf135Q9CWS1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rnf135Q9CWS1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
Rnf135Q9CWS1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC22.34■■□□□ 1.17
Rnf135Q9CWS1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rnf135Q9CWS1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Rnf135Q9CWS1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC22.33■■□□□ 1.17
Rnf135Q9CWS1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rnf135Q9CWS1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Rnf135Q9CWS1 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.33■■□□□ 1.17
Rnf135Q9CWS1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC22.33■■□□□ 1.17
Rnf135Q9CWS1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
Rnf135Q9CWS1 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Rnf135Q9CWS1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Rnf135Q9CWS1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC22.32■■□□□ 1.16
Rnf135Q9CWS1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rnf135Q9CWS1 Gm14523-201ENSMUST00000117260 558 ntBASIC22.32■■□□□ 1.16
Rnf135Q9CWS1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rnf135Q9CWS1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rnf135Q9CWS1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rnf135Q9CWS1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Rnf135Q9CWS1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Rnf135Q9CWS1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.31■■□□□ 1.16
Rnf135Q9CWS1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.31■■□□□ 1.16
Rnf135Q9CWS1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rnf135Q9CWS1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rnf135Q9CWS1 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rnf135Q9CWS1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rnf135Q9CWS1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Rnf135Q9CWS1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rnf135Q9CWS1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Rnf135Q9CWS1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms