Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.86■□□□□ 0.77
Q9CR55 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q9CR55 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q9CR55 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Q9CR55 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Q9CR55 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q9CR55 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q9CR55 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.85■□□□□ 0.77
Q9CR55 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Q9CR55 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q9CR55 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Q9CR55 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q9CR55 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.84■□□□□ 0.77
Q9CR55 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Q9CR55 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Q9CR55 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q9CR55 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q9CR55 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Q9CR55 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Q9CR55 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Q9CR55 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Q9CR55 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Q9CR55 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Q9CR55 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.82■□□□□ 0.76
Q9CR55 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Q9CR55 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q9CR55 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q9CR55 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q9CR55 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q9CR55 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q9CR55 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
Q9CR55 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.81■□□□□ 0.76
Q9CR55 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Q9CR55 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Q9CR55 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Q9CR55 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Q9CR55 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q9CR55 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q9CR55 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q9CR55 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q9CR55 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.79■□□□□ 0.76
Q9CR55 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.79■□□□□ 0.76
Q9CR55 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q9CR55 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q9CR55 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q9CR55 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.78■□□□□ 0.76
Q9CR55 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q9CR55 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.78■□□□□ 0.76
Q9CR55 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q9CR55 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q9CR55 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q9CR55 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q9CR55 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q9CR55 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q9CR55 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.77■□□□□ 0.76
Q9CR55 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Q9CR55 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Q9CR55 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.76■□□□□ 0.75
Q9CR55 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Q9CR55 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Q9CR55 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.76■□□□□ 0.75
Q9CR55 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Q9CR55 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Q9CR55 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Q9CR55 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Q9CR55 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Q9CR55 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Q9CR55 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Q9CR55 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Q9CR55 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Q9CR55 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Q9CR55 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Q9CR55 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Q9CR55 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Q9CR55 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Q9CR55 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Q9CR55 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Q9CR55 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Q9CR55 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Q9CR55 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Q9CR55 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Q9CR55 Gm8503-201ENSMUST00000118131 455 ntBASIC19.73■□□□□ 0.75
Q9CR55 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Q9CR55 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Q9CR55 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Q9CR55 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Q9CR55 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Q9CR55 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Q9CR55 Gm6821-201ENSMUST00000107540 542 ntBASIC19.72■□□□□ 0.75
Q9CR55 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.72■□□□□ 0.75
Q9CR55 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Q9CR55 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Q9CR55 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.71■□□□□ 0.75
Q9CR55 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q9CR55 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Q9CR55 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Q9CR55 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Q9CR55 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Q9CR55 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q9CR55 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms