Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
H2afb1Q9CQ70 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
H2afb1Q9CQ70 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
H2afb1Q9CQ70 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
H2afb1Q9CQ70 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.65■□□□□ 0.42
H2afb1Q9CQ70 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
H2afb1Q9CQ70 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb1Q9CQ70 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb1Q9CQ70 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
H2afb1Q9CQ70 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb1Q9CQ70 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb1Q9CQ70 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb1Q9CQ70 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb1Q9CQ70 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
H2afb1Q9CQ70 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
H2afb1Q9CQ70 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
H2afb1Q9CQ70 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
H2afb1Q9CQ70 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
H2afb1Q9CQ70 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H2afb1Q9CQ70 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H2afb1Q9CQ70 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H2afb1Q9CQ70 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H2afb1Q9CQ70 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.63■□□□□ 0.41
H2afb1Q9CQ70 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H2afb1Q9CQ70 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
H2afb1Q9CQ70 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.63■□□□□ 0.41
H2afb1Q9CQ70 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H2afb1Q9CQ70 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
H2afb1Q9CQ70 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.63■□□□□ 0.41
H2afb1Q9CQ70 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H2afb1Q9CQ70 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H2afb1Q9CQ70 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.62■□□□□ 0.41
H2afb1Q9CQ70 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2afb1Q9CQ70 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2afb1Q9CQ70 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
H2afb1Q9CQ70 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.62■□□□□ 0.41
H2afb1Q9CQ70 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
H2afb1Q9CQ70 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2afb1Q9CQ70 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2afb1Q9CQ70 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2afb1Q9CQ70 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.62■□□□□ 0.41
H2afb1Q9CQ70 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2afb1Q9CQ70 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2afb1Q9CQ70 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
H2afb1Q9CQ70 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.62■□□□□ 0.41
H2afb1Q9CQ70 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.61■□□□□ 0.41
H2afb1Q9CQ70 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
H2afb1Q9CQ70 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
H2afb1Q9CQ70 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H2afb1Q9CQ70 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.61■□□□□ 0.41
H2afb1Q9CQ70 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
H2afb1Q9CQ70 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
H2afb1Q9CQ70 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H2afb1Q9CQ70 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
H2afb1Q9CQ70 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb1Q9CQ70 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb1Q9CQ70 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb1Q9CQ70 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb1Q9CQ70 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb1Q9CQ70 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb1Q9CQ70 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.6■□□□□ 0.41
H2afb1Q9CQ70 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
H2afb1Q9CQ70 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb1Q9CQ70 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb1Q9CQ70 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb1Q9CQ70 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb1Q9CQ70 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
H2afb1Q9CQ70 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb1Q9CQ70 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb1Q9CQ70 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.59■□□□□ 0.41
H2afb1Q9CQ70 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb1Q9CQ70 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb1Q9CQ70 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
H2afb1Q9CQ70 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
H2afb1Q9CQ70 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
H2afb1Q9CQ70 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
H2afb1Q9CQ70 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
H2afb1Q9CQ70 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
H2afb1Q9CQ70 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb1Q9CQ70 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb1Q9CQ70 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb1Q9CQ70 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
H2afb1Q9CQ70 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb1Q9CQ70 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
H2afb1Q9CQ70 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb1Q9CQ70 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb1Q9CQ70 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb1Q9CQ70 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb1Q9CQ70 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb1Q9CQ70 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.56■□□□□ 0.4
H2afb1Q9CQ70 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.56■□□□□ 0.4
H2afb1Q9CQ70 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
H2afb1Q9CQ70 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb1Q9CQ70 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb1Q9CQ70 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.56■□□□□ 0.4
H2afb1Q9CQ70 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.56■□□□□ 0.4
H2afb1Q9CQ70 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
H2afb1Q9CQ70 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb1Q9CQ70 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
H2afb1Q9CQ70 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms