Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.44■□□□□ 0.7
Krt88Q9CPR6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.44■□□□□ 0.7
Krt88Q9CPR6 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.44■□□□□ 0.7
Krt88Q9CPR6 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.44■□□□□ 0.7
Krt88Q9CPR6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Krt88Q9CPR6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Krt88Q9CPR6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Krt88Q9CPR6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Krt88Q9CPR6 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Krt88Q9CPR6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Krt88Q9CPR6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Krt88Q9CPR6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Krt88Q9CPR6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Krt88Q9CPR6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Krt88Q9CPR6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.42■□□□□ 0.7
Krt88Q9CPR6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Krt88Q9CPR6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Krt88Q9CPR6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Krt88Q9CPR6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Krt88Q9CPR6 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Krt88Q9CPR6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Krt88Q9CPR6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Krt88Q9CPR6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.41■□□□□ 0.7
Krt88Q9CPR6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
Krt88Q9CPR6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Krt88Q9CPR6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Krt88Q9CPR6 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.4■□□□□ 0.7
Krt88Q9CPR6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Krt88Q9CPR6 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Krt88Q9CPR6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Krt88Q9CPR6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Krt88Q9CPR6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Krt88Q9CPR6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Krt88Q9CPR6 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Krt88Q9CPR6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Krt88Q9CPR6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.4■□□□□ 0.7
Krt88Q9CPR6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Krt88Q9CPR6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Krt88Q9CPR6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt88Q9CPR6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt88Q9CPR6 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.39■□□□□ 0.69
Krt88Q9CPR6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt88Q9CPR6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt88Q9CPR6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt88Q9CPR6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Krt88Q9CPR6 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt88Q9CPR6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.38■□□□□ 0.69
Krt88Q9CPR6 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.38■□□□□ 0.69
Krt88Q9CPR6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.38■□□□□ 0.69
Krt88Q9CPR6 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt88Q9CPR6 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.38■□□□□ 0.69
Krt88Q9CPR6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.38■□□□□ 0.69
Krt88Q9CPR6 Gm4799-201ENSMUST00000095396 657 ntBASIC19.38■□□□□ 0.69
Krt88Q9CPR6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt88Q9CPR6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Krt88Q9CPR6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Krt88Q9CPR6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt88Q9CPR6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt88Q9CPR6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.36■□□□□ 0.69
Krt88Q9CPR6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Krt88Q9CPR6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Krt88Q9CPR6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt88Q9CPR6 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.36■□□□□ 0.69
Krt88Q9CPR6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Krt88Q9CPR6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Krt88Q9CPR6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Krt88Q9CPR6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt88Q9CPR6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt88Q9CPR6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt88Q9CPR6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt88Q9CPR6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Krt88Q9CPR6 Gm9812-201ENSMUST00000061934 968 ntBASIC19.35■□□□□ 0.69
Krt88Q9CPR6 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.35■□□□□ 0.69
Krt88Q9CPR6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt88Q9CPR6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.35■□□□□ 0.69
Krt88Q9CPR6 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt88Q9CPR6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.34■□□□□ 0.69
Krt88Q9CPR6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.34■□□□□ 0.69
Krt88Q9CPR6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Krt88Q9CPR6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.34■□□□□ 0.69
Krt88Q9CPR6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Krt88Q9CPR6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Krt88Q9CPR6 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.33■□□□□ 0.69
Krt88Q9CPR6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt88Q9CPR6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Krt88Q9CPR6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt88Q9CPR6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt88Q9CPR6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt88Q9CPR6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt88Q9CPR6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Krt88Q9CPR6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.32■□□□□ 0.68
Krt88Q9CPR6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt88Q9CPR6 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt88Q9CPR6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt88Q9CPR6 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt88Q9CPR6 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt88Q9CPR6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Krt88Q9CPR6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt88Q9CPR6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Krt88Q9CPR6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 116.7 ms