Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim16Q99PP9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim16Q99PP9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Trim16Q99PP9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim16Q99PP9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Trim16Q99PP9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim16Q99PP9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim16Q99PP9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim16Q99PP9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim16Q99PP9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim16Q99PP9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.93■□□□□ 0.94
Trim16Q99PP9 Gm7332-201ENSMUST00000118351 454 ntBASIC20.93■□□□□ 0.94
Trim16Q99PP9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
Trim16Q99PP9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim16Q99PP9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim16Q99PP9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim16Q99PP9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim16Q99PP9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.92■□□□□ 0.94
Trim16Q99PP9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim16Q99PP9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Trim16Q99PP9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim16Q99PP9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim16Q99PP9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim16Q99PP9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim16Q99PP9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.91■□□□□ 0.94
Trim16Q99PP9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.91■□□□□ 0.94
Trim16Q99PP9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim16Q99PP9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Trim16Q99PP9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.9■□□□□ 0.94
Trim16Q99PP9 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.9■□□□□ 0.94
Trim16Q99PP9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Trim16Q99PP9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim16Q99PP9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim16Q99PP9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim16Q99PP9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim16Q99PP9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Trim16Q99PP9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.89■□□□□ 0.93
Trim16Q99PP9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
Trim16Q99PP9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim16Q99PP9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim16Q99PP9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.89■□□□□ 0.93
Trim16Q99PP9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim16Q99PP9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim16Q99PP9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim16Q99PP9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Trim16Q99PP9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim16Q99PP9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Trim16Q99PP9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Trim16Q99PP9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim16Q99PP9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim16Q99PP9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim16Q99PP9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.87■□□□□ 0.93
Trim16Q99PP9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim16Q99PP9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim16Q99PP9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim16Q99PP9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim16Q99PP9 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim16Q99PP9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim16Q99PP9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim16Q99PP9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.86■□□□□ 0.93
Trim16Q99PP9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim16Q99PP9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim16Q99PP9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Trim16Q99PP9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim16Q99PP9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim16Q99PP9 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim16Q99PP9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim16Q99PP9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim16Q99PP9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim16Q99PP9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim16Q99PP9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim16Q99PP9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim16Q99PP9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim16Q99PP9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim16Q99PP9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim16Q99PP9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim16Q99PP9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim16Q99PP9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trim16Q99PP9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Trim16Q99PP9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim16Q99PP9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim16Q99PP9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Trim16Q99PP9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim16Q99PP9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Trim16Q99PP9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim16Q99PP9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim16Q99PP9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim16Q99PP9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim16Q99PP9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim16Q99PP9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Trim16Q99PP9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Trim16Q99PP9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim16Q99PP9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim16Q99PP9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim16Q99PP9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim16Q99PP9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim16Q99PP9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim16Q99PP9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Trim16Q99PP9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim16Q99PP9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms