Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Trim34aQ99PP6 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC26.95■■□□□ 1.91
Trim34aQ99PP6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
Trim34aQ99PP6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Trim34aQ99PP6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC26.95■■□□□ 1.9
Trim34aQ99PP6 Gm28731-201ENSMUST00000185564 1569 ntBASIC26.94■■□□□ 1.9
Trim34aQ99PP6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Trim34aQ99PP6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC26.94■■□□□ 1.9
Trim34aQ99PP6 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC26.94■■□□□ 1.9
Trim34aQ99PP6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Trim34aQ99PP6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Trim34aQ99PP6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Trim34aQ99PP6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Trim34aQ99PP6 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Trim34aQ99PP6 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Trim34aQ99PP6 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Trim34aQ99PP6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Trim34aQ99PP6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Trim34aQ99PP6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Trim34aQ99PP6 Gm22238-201ENSMUST00000175222 88 ntBASIC26.92■■□□□ 1.9
Trim34aQ99PP6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Trim34aQ99PP6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC26.91■■□□□ 1.9
Trim34aQ99PP6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Trim34aQ99PP6 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Trim34aQ99PP6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC26.91■■□□□ 1.9
Trim34aQ99PP6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Trim34aQ99PP6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
Trim34aQ99PP6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC26.9■■□□□ 1.9
Trim34aQ99PP6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Trim34aQ99PP6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Trim34aQ99PP6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Trim34aQ99PP6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Trim34aQ99PP6 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Trim34aQ99PP6 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trim34aQ99PP6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trim34aQ99PP6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trim34aQ99PP6 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trim34aQ99PP6 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
Trim34aQ99PP6 Gm10399-202ENSMUST00000202768 748 ntBASIC26.89■■□□□ 1.9
Trim34aQ99PP6 Gm13241-201ENSMUST00000094493 780 ntBASIC26.89■■□□□ 1.9
Trim34aQ99PP6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Trim34aQ99PP6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC26.89■■□□□ 1.89
Trim34aQ99PP6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.89
Trim34aQ99PP6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Trim34aQ99PP6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Trim34aQ99PP6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Trim34aQ99PP6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Trim34aQ99PP6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
Trim34aQ99PP6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Trim34aQ99PP6 Gm8093-201ENSMUST00000128935 1892 ntBASIC26.87■■□□□ 1.89
Trim34aQ99PP6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Trim34aQ99PP6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Trim34aQ99PP6 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
Trim34aQ99PP6 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Trim34aQ99PP6 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC26.86■■□□□ 1.89
Trim34aQ99PP6 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Trim34aQ99PP6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Trim34aQ99PP6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC26.85■■□□□ 1.89
Trim34aQ99PP6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Trim34aQ99PP6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Trim34aQ99PP6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Trim34aQ99PP6 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Trim34aQ99PP6 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Trim34aQ99PP6 Gm9847-201ENSMUST00000052528 599 ntBASIC26.84■■□□□ 1.89
Trim34aQ99PP6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Trim34aQ99PP6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC26.84■■□□□ 1.89
Trim34aQ99PP6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Trim34aQ99PP6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Trim34aQ99PP6 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
Trim34aQ99PP6 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Trim34aQ99PP6 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Trim34aQ99PP6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Trim34aQ99PP6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Trim34aQ99PP6 Gm43034-201ENSMUST00000198678 1364 ntBASIC26.82■■□□□ 1.88
Trim34aQ99PP6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Trim34aQ99PP6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Trim34aQ99PP6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Trim34aQ99PP6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC26.81■■□□□ 1.88
Trim34aQ99PP6 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Trim34aQ99PP6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Trim34aQ99PP6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Trim34aQ99PP6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Trim34aQ99PP6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
Trim34aQ99PP6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Trim34aQ99PP6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
Trim34aQ99PP6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
Trim34aQ99PP6 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Trim34aQ99PP6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC26.79■■□□□ 1.88
Trim34aQ99PP6 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Trim34aQ99PP6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC26.78■■□□□ 1.88
Trim34aQ99PP6 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Trim34aQ99PP6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Trim34aQ99PP6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
Trim34aQ99PP6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Trim34aQ99PP6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Trim34aQ99PP6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC26.76■■□□□ 1.87
Trim34aQ99PP6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Trim34aQ99PP6 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Trim34aQ99PP6 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Trim34aQ99PP6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms