Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Pcdh15Q99PJ1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Pcdh15Q99PJ1 Gm8093-201ENSMUST00000128935 1892 ntBASIC25.43■■□□□ 1.66
Pcdh15Q99PJ1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC25.43■■□□□ 1.66
Pcdh15Q99PJ1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Pcdh15Q99PJ1 Gm18284-201ENSMUST00000172604 624 ntBASIC25.43■■□□□ 1.66
Pcdh15Q99PJ1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC25.43■■□□□ 1.66
Pcdh15Q99PJ1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
Pcdh15Q99PJ1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
Pcdh15Q99PJ1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Pcdh15Q99PJ1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC25.42■■□□□ 1.66
Pcdh15Q99PJ1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Pcdh15Q99PJ1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Pcdh15Q99PJ1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC25.41■■□□□ 1.66
Pcdh15Q99PJ1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdh15Q99PJ1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdh15Q99PJ1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdh15Q99PJ1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
Pcdh15Q99PJ1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC25.41■■□□□ 1.66
Pcdh15Q99PJ1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC25.41■■□□□ 1.66
Pcdh15Q99PJ1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdh15Q99PJ1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdh15Q99PJ1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdh15Q99PJ1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC25.4■■□□□ 1.66
Pcdh15Q99PJ1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Pcdh15Q99PJ1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
Pcdh15Q99PJ1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Pcdh15Q99PJ1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Pcdh15Q99PJ1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Pcdh15Q99PJ1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC25.39■■□□□ 1.65
Pcdh15Q99PJ1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.38■■□□□ 1.65
Pcdh15Q99PJ1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Pcdh15Q99PJ1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Pcdh15Q99PJ1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdh15Q99PJ1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdh15Q99PJ1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Pcdh15Q99PJ1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdh15Q99PJ1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Pcdh15Q99PJ1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC25.36■■□□□ 1.65
Pcdh15Q99PJ1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC25.36■■□□□ 1.65
Pcdh15Q99PJ1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Pcdh15Q99PJ1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC25.35■■□□□ 1.65
Pcdh15Q99PJ1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Pcdh15Q99PJ1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Pcdh15Q99PJ1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC25.35■■□□□ 1.65
Pcdh15Q99PJ1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
Pcdh15Q99PJ1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdh15Q99PJ1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Pcdh15Q99PJ1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC25.34■■□□□ 1.65
Pcdh15Q99PJ1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC25.34■■□□□ 1.65
Pcdh15Q99PJ1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Pcdh15Q99PJ1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdh15Q99PJ1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdh15Q99PJ1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdh15Q99PJ1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC25.33■■□□□ 1.65
Pcdh15Q99PJ1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdh15Q99PJ1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdh15Q99PJ1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC25.33■■□□□ 1.65
Pcdh15Q99PJ1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdh15Q99PJ1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdh15Q99PJ1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdh15Q99PJ1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Pcdh15Q99PJ1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC25.31■■□□□ 1.64
Pcdh15Q99PJ1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdh15Q99PJ1 Gm2011-201ENSMUST00000203124 1263 ntBASIC25.31■■□□□ 1.64
Pcdh15Q99PJ1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdh15Q99PJ1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdh15Q99PJ1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdh15Q99PJ1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdh15Q99PJ1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdh15Q99PJ1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdh15Q99PJ1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC25.31■■□□□ 1.64
Pcdh15Q99PJ1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdh15Q99PJ1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdh15Q99PJ1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdh15Q99PJ1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC25.3■■□□□ 1.64
Pcdh15Q99PJ1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdh15Q99PJ1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdh15Q99PJ1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdh15Q99PJ1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdh15Q99PJ1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdh15Q99PJ1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC25.29■■□□□ 1.64
Pcdh15Q99PJ1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdh15Q99PJ1 Gm8495-201ENSMUST00000188740 694 ntBASIC25.27■■□□□ 1.64
Pcdh15Q99PJ1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdh15Q99PJ1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdh15Q99PJ1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC25.26■■□□□ 1.63
Pcdh15Q99PJ1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdh15Q99PJ1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdh15Q99PJ1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdh15Q99PJ1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC25.25■■□□□ 1.63
Pcdh15Q99PJ1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
Pcdh15Q99PJ1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdh15Q99PJ1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdh15Q99PJ1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC25.25■■□□□ 1.63
Pcdh15Q99PJ1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC25.25■■□□□ 1.63
Pcdh15Q99PJ1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdh15Q99PJ1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
Pcdh15Q99PJ1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdh15Q99PJ1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms