Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Rfc4Q99J62 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Rfc4Q99J62 AC153524.1-201ENSMUST00000220436 1935 ntBASIC25.14■■□□□ 1.62
Rfc4Q99J62 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC25.14■■□□□ 1.62
Rfc4Q99J62 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC25.14■■□□□ 1.61
Rfc4Q99J62 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Rfc4Q99J62 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC25.13■■□□□ 1.61
Rfc4Q99J62 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
Rfc4Q99J62 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Rfc4Q99J62 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC25.12■■□□□ 1.61
Rfc4Q99J62 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
Rfc4Q99J62 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Rfc4Q99J62 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC25.11■■□□□ 1.61
Rfc4Q99J62 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC25.11■■□□□ 1.61
Rfc4Q99J62 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Rfc4Q99J62 Gm21956-201ENSMUST00000179946 522 ntBASIC25.1■■□□□ 1.61
Rfc4Q99J62 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Rfc4Q99J62 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC25.1■■□□□ 1.61
Rfc4Q99J62 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Rfc4Q99J62 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Rfc4Q99J62 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
Rfc4Q99J62 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC25.1■■□□□ 1.61
Rfc4Q99J62 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Rfc4Q99J62 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rfc4Q99J62 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
Rfc4Q99J62 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Rfc4Q99J62 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Rfc4Q99J62 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC25.08■■□□□ 1.61
Rfc4Q99J62 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Rfc4Q99J62 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Rfc4Q99J62 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Rfc4Q99J62 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Rfc4Q99J62 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Rfc4Q99J62 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC25.07■■□□□ 1.6
Rfc4Q99J62 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Rfc4Q99J62 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC25.07■■□□□ 1.6
Rfc4Q99J62 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC25.07■■□□□ 1.6
Rfc4Q99J62 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Rfc4Q99J62 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Rfc4Q99J62 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Rfc4Q99J62 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rfc4Q99J62 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rfc4Q99J62 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
Rfc4Q99J62 Gm11847-201ENSMUST00000125165 1119 ntBASIC25.05■■□□□ 1.6
Rfc4Q99J62 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC25.05■■□□□ 1.6
Rfc4Q99J62 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rfc4Q99J62 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC25.05■■□□□ 1.6
Rfc4Q99J62 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rfc4Q99J62 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Rfc4Q99J62 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rfc4Q99J62 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC25.04■■□□□ 1.6
Rfc4Q99J62 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC25.04■■□□□ 1.6
Rfc4Q99J62 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rfc4Q99J62 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Rfc4Q99J62 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rfc4Q99J62 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rfc4Q99J62 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Rfc4Q99J62 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC25.03■■□□□ 1.6
Rfc4Q99J62 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC25.03■■□□□ 1.6
Rfc4Q99J62 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rfc4Q99J62 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Rfc4Q99J62 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rfc4Q99J62 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Rfc4Q99J62 Gm10399-202ENSMUST00000202768 748 ntBASIC25.02■■□□□ 1.6
Rfc4Q99J62 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rfc4Q99J62 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rfc4Q99J62 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rfc4Q99J62 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Rfc4Q99J62 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
Rfc4Q99J62 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Rfc4Q99J62 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC25■■□□□ 1.59
Rfc4Q99J62 Gm12922-201ENSMUST00000120626 809 ntBASIC25■■□□□ 1.59
Rfc4Q99J62 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Rfc4Q99J62 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Rfc4Q99J62 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Rfc4Q99J62 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Rfc4Q99J62 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Rfc4Q99J62 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Rfc4Q99J62 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Rfc4Q99J62 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Rfc4Q99J62 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rfc4Q99J62 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC24.98■■□□□ 1.59
Rfc4Q99J62 Nsd1-206ENSMUST00000224918 1001 ntBASIC24.98■■□□□ 1.59
Rfc4Q99J62 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Rfc4Q99J62 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rfc4Q99J62 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rfc4Q99J62 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rfc4Q99J62 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rfc4Q99J62 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rfc4Q99J62 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC24.96■■□□□ 1.59
Rfc4Q99J62 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC24.96■■□□□ 1.59
Rfc4Q99J62 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rfc4Q99J62 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
Rfc4Q99J62 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC24.95■■□□□ 1.59
Rfc4Q99J62 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC24.95■■□□□ 1.58
Rfc4Q99J62 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Rfc4Q99J62 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Rfc4Q99J62 AC117245.4-201ENSMUST00000217388 1646 ntBASIC24.94■■□□□ 1.58
Rfc4Q99J62 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC24.94■■□□□ 1.58
Rfc4Q99J62 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms