Protein–RNA interactions for Protein: Q99246

Cacna1d, Voltage-dependent L-type calcium channel subunit alpha-1D, mousemouse

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1dQ99246 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.6■■□□□ 1.05
Cacna1dQ99246 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.6■■□□□ 1.05
Cacna1dQ99246 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cacna1dQ99246 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cacna1dQ99246 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cacna1dQ99246 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cacna1dQ99246 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Cacna1dQ99246 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cacna1dQ99246 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Cacna1dQ99246 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cacna1dQ99246 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cacna1dQ99246 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cacna1dQ99246 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cacna1dQ99246 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cacna1dQ99246 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.58■■□□□ 1.04
Cacna1dQ99246 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.58■■□□□ 1.04
Cacna1dQ99246 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cacna1dQ99246 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cacna1dQ99246 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Cacna1dQ99246 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cacna1dQ99246 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cacna1dQ99246 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.57■■□□□ 1.04
Cacna1dQ99246 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.57■■□□□ 1.04
Cacna1dQ99246 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cacna1dQ99246 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cacna1dQ99246 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cacna1dQ99246 Etf1-202ENSMUST00000180351 108 ntBASIC21.56■■□□□ 1.04
Cacna1dQ99246 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cacna1dQ99246 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cacna1dQ99246 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.56■■□□□ 1.04
Cacna1dQ99246 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cacna1dQ99246 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cacna1dQ99246 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cacna1dQ99246 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cacna1dQ99246 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cacna1dQ99246 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cacna1dQ99246 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.55■■□□□ 1.04
Cacna1dQ99246 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.55■■□□□ 1.04
Cacna1dQ99246 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.55■■□□□ 1.04
Cacna1dQ99246 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cacna1dQ99246 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Cacna1dQ99246 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.54■■□□□ 1.04
Cacna1dQ99246 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cacna1dQ99246 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.54■■□□□ 1.04
Cacna1dQ99246 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Cacna1dQ99246 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.54■■□□□ 1.04
Cacna1dQ99246 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cacna1dQ99246 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cacna1dQ99246 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.53■■□□□ 1.04
Cacna1dQ99246 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cacna1dQ99246 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cacna1dQ99246 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cacna1dQ99246 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cacna1dQ99246 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cacna1dQ99246 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cacna1dQ99246 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cacna1dQ99246 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.52■■□□□ 1.04
Cacna1dQ99246 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cacna1dQ99246 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cacna1dQ99246 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.51■■□□□ 1.03
Cacna1dQ99246 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cacna1dQ99246 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cacna1dQ99246 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.51■■□□□ 1.03
Cacna1dQ99246 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cacna1dQ99246 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cacna1dQ99246 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cacna1dQ99246 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cacna1dQ99246 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cacna1dQ99246 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.5■■□□□ 1.03
Cacna1dQ99246 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cacna1dQ99246 Gm7417-201ENSMUST00000192950 473 ntBASIC21.49■■□□□ 1.03
Cacna1dQ99246 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cacna1dQ99246 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Cacna1dQ99246 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.49■■□□□ 1.03
Cacna1dQ99246 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Cacna1dQ99246 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.48■■□□□ 1.03
Cacna1dQ99246 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cacna1dQ99246 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cacna1dQ99246 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.47■■□□□ 1.03
Cacna1dQ99246 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cacna1dQ99246 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.47■■□□□ 1.03
Cacna1dQ99246 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.47■■□□□ 1.03
Cacna1dQ99246 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
Cacna1dQ99246 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cacna1dQ99246 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.46■■□□□ 1.03
Cacna1dQ99246 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Cacna1dQ99246 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.46■■□□□ 1.03
Cacna1dQ99246 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cacna1dQ99246 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.46■■□□□ 1.03
Cacna1dQ99246 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cacna1dQ99246 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cacna1dQ99246 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Cacna1dQ99246 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.46■■□□□ 1.03
Cacna1dQ99246 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Cacna1dQ99246 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.45■■□□□ 1.03
Cacna1dQ99246 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Cacna1dQ99246 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.45■■□□□ 1.03
Cacna1dQ99246 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Cacna1dQ99246 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cacna1dQ99246 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms