Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb1Q91Y08 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhb1Q91Y08 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhb1Q91Y08 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhb1Q91Y08 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhb1Q91Y08 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhb1Q91Y08 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhb1Q91Y08 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhb1Q91Y08 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhb1Q91Y08 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Pcdhb1Q91Y08 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhb1Q91Y08 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.5■■□□□ 1.19
Pcdhb1Q91Y08 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhb1Q91Y08 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhb1Q91Y08 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC22.5■■□□□ 1.19
Pcdhb1Q91Y08 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Pcdhb1Q91Y08 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhb1Q91Y08 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhb1Q91Y08 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhb1Q91Y08 AC153962.1-201ENSMUST00000218530 1948 ntBASIC22.49■■□□□ 1.19
Pcdhb1Q91Y08 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhb1Q91Y08 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhb1Q91Y08 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Pcdhb1Q91Y08 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhb1Q91Y08 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhb1Q91Y08 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhb1Q91Y08 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC22.49■■□□□ 1.19
Pcdhb1Q91Y08 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Pcdhb1Q91Y08 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhb1Q91Y08 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhb1Q91Y08 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhb1Q91Y08 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhb1Q91Y08 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhb1Q91Y08 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhb1Q91Y08 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhb1Q91Y08 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.47■■□□□ 1.19
Pcdhb1Q91Y08 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhb1Q91Y08 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.46■■□□□ 1.19
Pcdhb1Q91Y08 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhb1Q91Y08 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Pcdhb1Q91Y08 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhb1Q91Y08 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhb1Q91Y08 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb1Q91Y08 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb1Q91Y08 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb1Q91Y08 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb1Q91Y08 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.45■■□□□ 1.18
Pcdhb1Q91Y08 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb1Q91Y08 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb1Q91Y08 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhb1Q91Y08 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhb1Q91Y08 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhb1Q91Y08 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Pcdhb1Q91Y08 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.44■■□□□ 1.18
Pcdhb1Q91Y08 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhb1Q91Y08 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb1Q91Y08 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb1Q91Y08 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb1Q91Y08 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.43■■□□□ 1.18
Pcdhb1Q91Y08 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.43■■□□□ 1.18
Pcdhb1Q91Y08 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb1Q91Y08 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb1Q91Y08 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb1Q91Y08 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb1Q91Y08 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.42■■□□□ 1.18
Pcdhb1Q91Y08 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb1Q91Y08 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC22.42■■□□□ 1.18
Pcdhb1Q91Y08 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb1Q91Y08 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Pcdhb1Q91Y08 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb1Q91Y08 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.42■■□□□ 1.18
Pcdhb1Q91Y08 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.42■■□□□ 1.18
Pcdhb1Q91Y08 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb1Q91Y08 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb1Q91Y08 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.41■■□□□ 1.18
Pcdhb1Q91Y08 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22.41■■□□□ 1.18
Pcdhb1Q91Y08 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb1Q91Y08 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb1Q91Y08 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb1Q91Y08 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb1Q91Y08 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.41■■□□□ 1.18
Pcdhb1Q91Y08 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb1Q91Y08 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb1Q91Y08 Gm10420-201ENSMUST00000121713 882 ntBASIC22.4■■□□□ 1.18
Pcdhb1Q91Y08 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.4■■□□□ 1.18
Pcdhb1Q91Y08 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC22.4■■□□□ 1.18
Pcdhb1Q91Y08 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Pcdhb1Q91Y08 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.4■■□□□ 1.18
Pcdhb1Q91Y08 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb1Q91Y08 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb1Q91Y08 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Pcdhb1Q91Y08 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC22.39■■□□□ 1.18
Pcdhb1Q91Y08 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhb1Q91Y08 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb1Q91Y08 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.38■■□□□ 1.17
Pcdhb1Q91Y08 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb1Q91Y08 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb1Q91Y08 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC22.37■■□□□ 1.17
Pcdhb1Q91Y08 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC22.37■■□□□ 1.17
Pcdhb1Q91Y08 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms