Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb6Q91XZ4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Pcdhb6Q91XZ4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb6Q91XZ4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb6Q91XZ4 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb6Q91XZ4 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Pcdhb6Q91XZ4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb6Q91XZ4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb6Q91XZ4 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb6Q91XZ4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Pcdhb6Q91XZ4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb6Q91XZ4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb6Q91XZ4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb6Q91XZ4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb6Q91XZ4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC22.29■■□□□ 1.16
Pcdhb6Q91XZ4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb6Q91XZ4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb6Q91XZ4 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.28■■□□□ 1.16
Pcdhb6Q91XZ4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb6Q91XZ4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.28■■□□□ 1.16
Pcdhb6Q91XZ4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb6Q91XZ4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb6Q91XZ4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb6Q91XZ4 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb6Q91XZ4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22.27■■□□□ 1.16
Pcdhb6Q91XZ4 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb6Q91XZ4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.27■■□□□ 1.16
Pcdhb6Q91XZ4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Pcdhb6Q91XZ4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb6Q91XZ4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.26■■□□□ 1.15
Pcdhb6Q91XZ4 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb6Q91XZ4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb6Q91XZ4 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb6Q91XZ4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhb6Q91XZ4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.25■■□□□ 1.15
Pcdhb6Q91XZ4 Gm10420-201ENSMUST00000121713 882 ntBASIC22.25■■□□□ 1.15
Pcdhb6Q91XZ4 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC22.25■■□□□ 1.15
Pcdhb6Q91XZ4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.25■■□□□ 1.15
Pcdhb6Q91XZ4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhb6Q91XZ4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Pcdhb6Q91XZ4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb6Q91XZ4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb6Q91XZ4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
Pcdhb6Q91XZ4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.24■■□□□ 1.15
Pcdhb6Q91XZ4 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.24■■□□□ 1.15
Pcdhb6Q91XZ4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb6Q91XZ4 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.24■■□□□ 1.15
Pcdhb6Q91XZ4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb6Q91XZ4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb6Q91XZ4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb6Q91XZ4 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb6Q91XZ4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb6Q91XZ4 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb6Q91XZ4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC22.23■■□□□ 1.15
Pcdhb6Q91XZ4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.23■■□□□ 1.15
Pcdhb6Q91XZ4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb6Q91XZ4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb6Q91XZ4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb6Q91XZ4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb6Q91XZ4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.22■■□□□ 1.15
Pcdhb6Q91XZ4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb6Q91XZ4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb6Q91XZ4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb6Q91XZ4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb6Q91XZ4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Pcdhb6Q91XZ4 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.2■■□□□ 1.14
Pcdhb6Q91XZ4 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.2■■□□□ 1.14
Pcdhb6Q91XZ4 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb6Q91XZ4 Cap2-205ENSMUST00000225824 1634 ntBASIC22.2■■□□□ 1.14
Pcdhb6Q91XZ4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC22.2■■□□□ 1.14
Pcdhb6Q91XZ4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb6Q91XZ4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.19■■□□□ 1.14
Pcdhb6Q91XZ4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Pcdhb6Q91XZ4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb6Q91XZ4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb6Q91XZ4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhb6Q91XZ4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhb6Q91XZ4 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhb6Q91XZ4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.18■■□□□ 1.14
Pcdhb6Q91XZ4 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.18■■□□□ 1.14
Pcdhb6Q91XZ4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC22.18■■□□□ 1.14
Pcdhb6Q91XZ4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhb6Q91XZ4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhb6Q91XZ4 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Pcdhb6Q91XZ4 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.17■■□□□ 1.14
Pcdhb6Q91XZ4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhb6Q91XZ4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhb6Q91XZ4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.17■■□□□ 1.14
Pcdhb6Q91XZ4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhb6Q91XZ4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhb6Q91XZ4 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhb6Q91XZ4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC22.17■■□□□ 1.14
Pcdhb6Q91XZ4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb6Q91XZ4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb6Q91XZ4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.16■■□□□ 1.14
Pcdhb6Q91XZ4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhb6Q91XZ4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhb6Q91XZ4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Pcdhb6Q91XZ4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhb6Q91XZ4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 178.1 ms