Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb8Q91XZ2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb8Q91XZ2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb8Q91XZ2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.04■□□□□ 0.96
Pcdhb8Q91XZ2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb8Q91XZ2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb8Q91XZ2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb8Q91XZ2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb8Q91XZ2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.04■□□□□ 0.96
Pcdhb8Q91XZ2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb8Q91XZ2 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb8Q91XZ2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb8Q91XZ2 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb8Q91XZ2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb8Q91XZ2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.03■□□□□ 0.96
Pcdhb8Q91XZ2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb8Q91XZ2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Pcdhb8Q91XZ2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Pcdhb8Q91XZ2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.03■□□□□ 0.96
Pcdhb8Q91XZ2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb8Q91XZ2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb8Q91XZ2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb8Q91XZ2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Pcdhb8Q91XZ2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.02■□□□□ 0.95
Pcdhb8Q91XZ2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb8Q91XZ2 Gm14523-201ENSMUST00000117260 558 ntBASIC21.01■□□□□ 0.95
Pcdhb8Q91XZ2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
Pcdhb8Q91XZ2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb8Q91XZ2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb8Q91XZ2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb8Q91XZ2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21■□□□□ 0.95
Pcdhb8Q91XZ2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21■□□□□ 0.95
Pcdhb8Q91XZ2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21■□□□□ 0.95
Pcdhb8Q91XZ2 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21■□□□□ 0.95
Pcdhb8Q91XZ2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb8Q91XZ2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.99■□□□□ 0.95
Pcdhb8Q91XZ2 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.99■□□□□ 0.95
Pcdhb8Q91XZ2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb8Q91XZ2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb8Q91XZ2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb8Q91XZ2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb8Q91XZ2 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb8Q91XZ2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb8Q91XZ2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb8Q91XZ2 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb8Q91XZ2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb8Q91XZ2 Mir6538-201ENSMUST00000183713 110 ntBASIC20.98■□□□□ 0.95
Pcdhb8Q91XZ2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb8Q91XZ2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb8Q91XZ2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb8Q91XZ2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb8Q91XZ2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.98■□□□□ 0.95
Pcdhb8Q91XZ2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb8Q91XZ2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Pcdhb8Q91XZ2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.97■□□□□ 0.95
Pcdhb8Q91XZ2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb8Q91XZ2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb8Q91XZ2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb8Q91XZ2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb8Q91XZ2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.96■□□□□ 0.95
Pcdhb8Q91XZ2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb8Q91XZ2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb8Q91XZ2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb8Q91XZ2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb8Q91XZ2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.96■□□□□ 0.95
Pcdhb8Q91XZ2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb8Q91XZ2 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.96■□□□□ 0.95
Pcdhb8Q91XZ2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb8Q91XZ2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Pcdhb8Q91XZ2 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Pcdhb8Q91XZ2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Pcdhb8Q91XZ2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb8Q91XZ2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb8Q91XZ2 Gm7332-201ENSMUST00000118351 454 ntBASIC20.95■□□□□ 0.94
Pcdhb8Q91XZ2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.95■□□□□ 0.94
Pcdhb8Q91XZ2 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.95■□□□□ 0.94
Pcdhb8Q91XZ2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb8Q91XZ2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb8Q91XZ2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb8Q91XZ2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb8Q91XZ2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb8Q91XZ2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.95■□□□□ 0.94
Pcdhb8Q91XZ2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb8Q91XZ2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb8Q91XZ2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.94■□□□□ 0.94
Pcdhb8Q91XZ2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.94■□□□□ 0.94
Pcdhb8Q91XZ2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb8Q91XZ2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb8Q91XZ2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb8Q91XZ2 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb8Q91XZ2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb8Q91XZ2 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb8Q91XZ2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb8Q91XZ2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb8Q91XZ2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.93■□□□□ 0.94
Pcdhb8Q91XZ2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Pcdhb8Q91XZ2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.93■□□□□ 0.94
Pcdhb8Q91XZ2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb8Q91XZ2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb8Q91XZ2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms