Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhga3Q91XY5 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhga3Q91XY5 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhga3Q91XY5 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Pcdhga3Q91XY5 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.09■□□□□ 0.65
Pcdhga3Q91XY5 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhga3Q91XY5 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhga3Q91XY5 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhga3Q91XY5 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhga3Q91XY5 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.08■□□□□ 0.64
Pcdhga3Q91XY5 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhga3Q91XY5 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Pcdhga3Q91XY5 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhga3Q91XY5 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Pcdhga3Q91XY5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
Pcdhga3Q91XY5 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhga3Q91XY5 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Pcdhga3Q91XY5 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhga3Q91XY5 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhga3Q91XY5 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhga3Q91XY5 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga3Q91XY5 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.06■□□□□ 0.64
Pcdhga3Q91XY5 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga3Q91XY5 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.06■□□□□ 0.64
Pcdhga3Q91XY5 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga3Q91XY5 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga3Q91XY5 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Pcdhga3Q91XY5 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhga3Q91XY5 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhga3Q91XY5 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhga3Q91XY5 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.05■□□□□ 0.64
Pcdhga3Q91XY5 Gm27502-201ENSMUST00000183495 199 ntBASIC19.05■□□□□ 0.64
Pcdhga3Q91XY5 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhga3Q91XY5 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhga3Q91XY5 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga3Q91XY5 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga3Q91XY5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga3Q91XY5 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga3Q91XY5 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Pcdhga3Q91XY5 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Pcdhga3Q91XY5 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.04■□□□□ 0.64
Pcdhga3Q91XY5 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga3Q91XY5 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga3Q91XY5 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga3Q91XY5 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga3Q91XY5 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga3Q91XY5 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga3Q91XY5 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga3Q91XY5 Gm14523-201ENSMUST00000117260 558 ntBASIC19.03■□□□□ 0.64
Pcdhga3Q91XY5 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga3Q91XY5 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga3Q91XY5 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Pcdhga3Q91XY5 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhga3Q91XY5 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhga3Q91XY5 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhga3Q91XY5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhga3Q91XY5 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhga3Q91XY5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhga3Q91XY5 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Pcdhga3Q91XY5 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhga3Q91XY5 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga3Q91XY5 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga3Q91XY5 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga3Q91XY5 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga3Q91XY5 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga3Q91XY5 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.01■□□□□ 0.63
Pcdhga3Q91XY5 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga3Q91XY5 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga3Q91XY5 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.01■□□□□ 0.63
Pcdhga3Q91XY5 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga3Q91XY5 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga3Q91XY5 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Pcdhga3Q91XY5 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Pcdhga3Q91XY5 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19■□□□□ 0.63
Pcdhga3Q91XY5 Gm22567-201ENSMUST00000175542 342 ntBASIC19■□□□□ 0.63
Pcdhga3Q91XY5 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga3Q91XY5 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19■□□□□ 0.63
Pcdhga3Q91XY5 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga3Q91XY5 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga3Q91XY5 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga3Q91XY5 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga3Q91XY5 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga3Q91XY5 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.99■□□□□ 0.63
Pcdhga3Q91XY5 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga3Q91XY5 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga3Q91XY5 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga3Q91XY5 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga3Q91XY5 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.98■□□□□ 0.63
Pcdhga3Q91XY5 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Pcdhga3Q91XY5 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga3Q91XY5 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga3Q91XY5 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Pcdhga3Q91XY5 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Pcdhga3Q91XY5 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.98■□□□□ 0.63
Pcdhga3Q91XY5 Gm7332-201ENSMUST00000118351 454 ntBASIC18.98■□□□□ 0.63
Pcdhga3Q91XY5 Gm12366-201ENSMUST00000121722 873 ntBASIC18.98■□□□□ 0.63
Pcdhga3Q91XY5 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.98■□□□□ 0.63
Pcdhga3Q91XY5 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.98■□□□□ 0.63
Pcdhga3Q91XY5 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga3Q91XY5 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms