Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhga9Q91XX9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhga9Q91XX9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhga9Q91XX9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.33■■□□□ 1.01
Pcdhga9Q91XX9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.33■■□□□ 1.01
Pcdhga9Q91XX9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhga9Q91XX9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhga9Q91XX9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhga9Q91XX9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhga9Q91XX9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.32■■□□□ 1
Pcdhga9Q91XX9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhga9Q91XX9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdhga9Q91XX9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.32■■□□□ 1
Pcdhga9Q91XX9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhga9Q91XX9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhga9Q91XX9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Pcdhga9Q91XX9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhga9Q91XX9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhga9Q91XX9 Gm15546-201ENSMUST00000122095 826 ntBASIC21.31■■□□□ 1
Pcdhga9Q91XX9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.31■■□□□ 1
Pcdhga9Q91XX9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Pcdhga9Q91XX9 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Pcdhga9Q91XX9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhga9Q91XX9 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhga9Q91XX9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhga9Q91XX9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhga9Q91XX9 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhga9Q91XX9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.3■■□□□ 1
Pcdhga9Q91XX9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhga9Q91XX9 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhga9Q91XX9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.3■■□□□ 1
Pcdhga9Q91XX9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhga9Q91XX9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhga9Q91XX9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdhga9Q91XX9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhga9Q91XX9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.29■■□□□ 1
Pcdhga9Q91XX9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhga9Q91XX9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdhga9Q91XX9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Pcdhga9Q91XX9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.29■■□□□ 1
Pcdhga9Q91XX9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.29■■□□□ 1
Pcdhga9Q91XX9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Pcdhga9Q91XX9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Pcdhga9Q91XX9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhga9Q91XX9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhga9Q91XX9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Pcdhga9Q91XX9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhga9Q91XX9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhga9Q91XX9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Pcdhga9Q91XX9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhga9Q91XX9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Pcdhga9Q91XX9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.27■■□□□ 1
Pcdhga9Q91XX9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhga9Q91XX9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdhga9Q91XX9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Pcdhga9Q91XX9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Pcdhga9Q91XX9 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhga9Q91XX9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhga9Q91XX9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhga9Q91XX9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.26■□□□□ 0.99
Pcdhga9Q91XX9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhga9Q91XX9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga9Q91XX9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga9Q91XX9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga9Q91XX9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga9Q91XX9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga9Q91XX9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga9Q91XX9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga9Q91XX9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga9Q91XX9 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.25■□□□□ 0.99
Pcdhga9Q91XX9 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga9Q91XX9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga9Q91XX9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga9Q91XX9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga9Q91XX9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga9Q91XX9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga9Q91XX9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga9Q91XX9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhga9Q91XX9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhga9Q91XX9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhga9Q91XX9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhga9Q91XX9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhga9Q91XX9 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.24■□□□□ 0.99
Pcdhga9Q91XX9 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.24■□□□□ 0.99
Pcdhga9Q91XX9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
Pcdhga9Q91XX9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.23■□□□□ 0.99
Pcdhga9Q91XX9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.23■□□□□ 0.99
Pcdhga9Q91XX9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhga9Q91XX9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhga9Q91XX9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhga9Q91XX9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhga9Q91XX9 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhga9Q91XX9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhga9Q91XX9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.22■□□□□ 0.99
Pcdhga9Q91XX9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.22■□□□□ 0.99
Pcdhga9Q91XX9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhga9Q91XX9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhga9Q91XX9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhga9Q91XX9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Pcdhga9Q91XX9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms