Protein–RNA interactions for Protein: Q91V48

Pcdhb21, MCG1033322, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb21Q91V48 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb21Q91V48 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.33■■□□□ 1
Pcdhb21Q91V48 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.33■■□□□ 1
Pcdhb21Q91V48 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhb21Q91V48 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb21Q91V48 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb21Q91V48 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb21Q91V48 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb21Q91V48 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.32■■□□□ 1
Pcdhb21Q91V48 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Pcdhb21Q91V48 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb21Q91V48 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb21Q91V48 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb21Q91V48 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb21Q91V48 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb21Q91V48 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb21Q91V48 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb21Q91V48 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb21Q91V48 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb21Q91V48 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb21Q91V48 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb21Q91V48 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb21Q91V48 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb21Q91V48 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb21Q91V48 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Pcdhb21Q91V48 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb21Q91V48 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.3■■□□□ 1
Pcdhb21Q91V48 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.3■■□□□ 1
Pcdhb21Q91V48 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.3■■□□□ 1
Pcdhb21Q91V48 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb21Q91V48 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb21Q91V48 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.3■■□□□ 1
Pcdhb21Q91V48 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb21Q91V48 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb21Q91V48 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb21Q91V48 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.29■■□□□ 1
Pcdhb21Q91V48 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb21Q91V48 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb21Q91V48 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Pcdhb21Q91V48 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Pcdhb21Q91V48 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb21Q91V48 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
Pcdhb21Q91V48 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.28■■□□□ 1
Pcdhb21Q91V48 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb21Q91V48 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb21Q91V48 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.28■■□□□ 1
Pcdhb21Q91V48 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb21Q91V48 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Pcdhb21Q91V48 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb21Q91V48 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb21Q91V48 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.28■■□□□ 1
Pcdhb21Q91V48 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb21Q91V48 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb21Q91V48 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb21Q91V48 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Pcdhb21Q91V48 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb21Q91V48 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb21Q91V48 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.27■■□□□ 1
Pcdhb21Q91V48 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.27■■□□□ 1
Pcdhb21Q91V48 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb21Q91V48 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb21Q91V48 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Pcdhb21Q91V48 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Pcdhb21Q91V48 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Pcdhb21Q91V48 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Pcdhb21Q91V48 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb21Q91V48 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Pcdhb21Q91V48 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb21Q91V48 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb21Q91V48 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.26■□□□□ 0.99
Pcdhb21Q91V48 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb21Q91V48 Gm5921-201ENSMUST00000075898 882 ntBASIC21.26■□□□□ 0.99
Pcdhb21Q91V48 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.26■□□□□ 0.99
Pcdhb21Q91V48 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb21Q91V48 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Pcdhb21Q91V48 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb21Q91V48 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.25■□□□□ 0.99
Pcdhb21Q91V48 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb21Q91V48 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Pcdhb21Q91V48 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Pcdhb21Q91V48 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb21Q91V48 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.24■□□□□ 0.99
Pcdhb21Q91V48 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb21Q91V48 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb21Q91V48 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb21Q91V48 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb21Q91V48 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb21Q91V48 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Pcdhb21Q91V48 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.23■□□□□ 0.99
Pcdhb21Q91V48 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.23■□□□□ 0.99
Pcdhb21Q91V48 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.23■□□□□ 0.99
Pcdhb21Q91V48 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb21Q91V48 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb21Q91V48 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb21Q91V48 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb21Q91V48 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.23■□□□□ 0.99
Pcdhb21Q91V48 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Pcdhb21Q91V48 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb21Q91V48 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb21Q91V48 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms