Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkd2Q8VE28 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkd2Q8VE28 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkd2Q8VE28 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.58■□□□□ 0.73
Nkd2Q8VE28 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nkd2Q8VE28 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.58■□□□□ 0.72
Nkd2Q8VE28 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkd2Q8VE28 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nkd2Q8VE28 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.57■□□□□ 0.72
Nkd2Q8VE28 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Nkd2Q8VE28 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkd2Q8VE28 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkd2Q8VE28 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Nkd2Q8VE28 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.56■□□□□ 0.72
Nkd2Q8VE28 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Nkd2Q8VE28 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nkd2Q8VE28 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nkd2Q8VE28 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nkd2Q8VE28 Gm43566-201ENSMUST00000196851 808 ntBASIC19.56■□□□□ 0.72
Nkd2Q8VE28 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.56■□□□□ 0.72
Nkd2Q8VE28 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Nkd2Q8VE28 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkd2Q8VE28 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Nkd2Q8VE28 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkd2Q8VE28 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkd2Q8VE28 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkd2Q8VE28 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nkd2Q8VE28 Gm15039-201ENSMUST00000118914 875 ntBASIC19.55■□□□□ 0.72
Nkd2Q8VE28 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Nkd2Q8VE28 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.55■□□□□ 0.72
Nkd2Q8VE28 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Nkd2Q8VE28 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nkd2Q8VE28 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkd2Q8VE28 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.54■□□□□ 0.72
Nkd2Q8VE28 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkd2Q8VE28 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.54■□□□□ 0.72
Nkd2Q8VE28 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.54■□□□□ 0.72
Nkd2Q8VE28 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Nkd2Q8VE28 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.53■□□□□ 0.72
Nkd2Q8VE28 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nkd2Q8VE28 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Nkd2Q8VE28 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.53■□□□□ 0.72
Nkd2Q8VE28 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Nkd2Q8VE28 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkd2Q8VE28 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.52■□□□□ 0.72
Nkd2Q8VE28 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.52■□□□□ 0.72
Nkd2Q8VE28 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Nkd2Q8VE28 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkd2Q8VE28 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.52■□□□□ 0.72
Nkd2Q8VE28 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.52■□□□□ 0.72
Nkd2Q8VE28 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkd2Q8VE28 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkd2Q8VE28 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkd2Q8VE28 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nkd2Q8VE28 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkd2Q8VE28 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkd2Q8VE28 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Nkd2Q8VE28 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkd2Q8VE28 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Nkd2Q8VE28 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Nkd2Q8VE28 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.51■□□□□ 0.71
Nkd2Q8VE28 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Nkd2Q8VE28 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.51■□□□□ 0.71
Nkd2Q8VE28 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkd2Q8VE28 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.5■□□□□ 0.71
Nkd2Q8VE28 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkd2Q8VE28 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkd2Q8VE28 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.5■□□□□ 0.71
Nkd2Q8VE28 Gm45444-201ENSMUST00000211394 898 ntBASIC19.5■□□□□ 0.71
Nkd2Q8VE28 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Nkd2Q8VE28 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Nkd2Q8VE28 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkd2Q8VE28 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkd2Q8VE28 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.49■□□□□ 0.71
Nkd2Q8VE28 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkd2Q8VE28 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkd2Q8VE28 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkd2Q8VE28 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkd2Q8VE28 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkd2Q8VE28 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkd2Q8VE28 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.48■□□□□ 0.71
Nkd2Q8VE28 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Nkd2Q8VE28 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkd2Q8VE28 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkd2Q8VE28 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkd2Q8VE28 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkd2Q8VE28 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkd2Q8VE28 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkd2Q8VE28 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkd2Q8VE28 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nkd2Q8VE28 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.46■□□□□ 0.71
Nkd2Q8VE28 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkd2Q8VE28 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Nkd2Q8VE28 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkd2Q8VE28 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nkd2Q8VE28 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkd2Q8VE28 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.45■□□□□ 0.7
Nkd2Q8VE28 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.45■□□□□ 0.7
Nkd2Q8VE28 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nkd2Q8VE28 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms