Protein–RNA interactions for Protein: Q8VCZ8

Rpusd1, RNA pseudouridylate synthase domain-containing protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd1Q8VCZ8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.85■□□□□ 0.93
Rpusd1Q8VCZ8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.85■□□□□ 0.93
Rpusd1Q8VCZ8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpusd1Q8VCZ8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Rpusd1Q8VCZ8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpusd1Q8VCZ8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpusd1Q8VCZ8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rpusd1Q8VCZ8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.83■□□□□ 0.93
Rpusd1Q8VCZ8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.83■□□□□ 0.93
Rpusd1Q8VCZ8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.83■□□□□ 0.93
Rpusd1Q8VCZ8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rpusd1Q8VCZ8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rpusd1Q8VCZ8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpusd1Q8VCZ8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.82■□□□□ 0.92
Rpusd1Q8VCZ8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpusd1Q8VCZ8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.82■□□□□ 0.92
Rpusd1Q8VCZ8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpusd1Q8VCZ8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rpusd1Q8VCZ8 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpusd1Q8VCZ8 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpusd1Q8VCZ8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpusd1Q8VCZ8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.81■□□□□ 0.92
Rpusd1Q8VCZ8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpusd1Q8VCZ8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Rpusd1Q8VCZ8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rpusd1Q8VCZ8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rpusd1Q8VCZ8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.8■□□□□ 0.92
Rpusd1Q8VCZ8 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rpusd1Q8VCZ8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rpusd1Q8VCZ8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rpusd1Q8VCZ8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rpusd1Q8VCZ8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rpusd1Q8VCZ8 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.79■□□□□ 0.92
Rpusd1Q8VCZ8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rpusd1Q8VCZ8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rpusd1Q8VCZ8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rpusd1Q8VCZ8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
Rpusd1Q8VCZ8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rpusd1Q8VCZ8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.79■□□□□ 0.92
Rpusd1Q8VCZ8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpusd1Q8VCZ8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpusd1Q8VCZ8 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpusd1Q8VCZ8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpusd1Q8VCZ8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.78■□□□□ 0.92
Rpusd1Q8VCZ8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpusd1Q8VCZ8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpusd1Q8VCZ8 Gm40881-201ENSMUST00000223397 166 ntBASIC20.78■□□□□ 0.92
Rpusd1Q8VCZ8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Rpusd1Q8VCZ8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpusd1Q8VCZ8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.77■□□□□ 0.92
Rpusd1Q8VCZ8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rpusd1Q8VCZ8 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rpusd1Q8VCZ8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rpusd1Q8VCZ8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rpusd1Q8VCZ8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rpusd1Q8VCZ8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.76■□□□□ 0.91
Rpusd1Q8VCZ8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rpusd1Q8VCZ8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.76■□□□□ 0.91
Rpusd1Q8VCZ8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rpusd1Q8VCZ8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.75■□□□□ 0.91
Rpusd1Q8VCZ8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Rpusd1Q8VCZ8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rpusd1Q8VCZ8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rpusd1Q8VCZ8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Rpusd1Q8VCZ8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpusd1Q8VCZ8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpusd1Q8VCZ8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpusd1Q8VCZ8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.74■□□□□ 0.91
Rpusd1Q8VCZ8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpusd1Q8VCZ8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpusd1Q8VCZ8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rpusd1Q8VCZ8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.73■□□□□ 0.91
Rpusd1Q8VCZ8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.73■□□□□ 0.91
Rpusd1Q8VCZ8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpusd1Q8VCZ8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpusd1Q8VCZ8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpusd1Q8VCZ8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpusd1Q8VCZ8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Rpusd1Q8VCZ8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpusd1Q8VCZ8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.72■□□□□ 0.91
Rpusd1Q8VCZ8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpusd1Q8VCZ8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpusd1Q8VCZ8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpusd1Q8VCZ8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpusd1Q8VCZ8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpusd1Q8VCZ8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpusd1Q8VCZ8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Rpusd1Q8VCZ8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.71■□□□□ 0.91
Rpusd1Q8VCZ8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Rpusd1Q8VCZ8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.71■□□□□ 0.91
Rpusd1Q8VCZ8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rpusd1Q8VCZ8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpusd1Q8VCZ8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.71■□□□□ 0.91
Rpusd1Q8VCZ8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Rpusd1Q8VCZ8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rpusd1Q8VCZ8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Rpusd1Q8VCZ8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpusd1Q8VCZ8 Gm10399-202ENSMUST00000202768 748 ntBASIC20.7■□□□□ 0.9
Rpusd1Q8VCZ8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpusd1Q8VCZ8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms