Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vps39Q8R5L3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Vps39Q8R5L3 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Vps39Q8R5L3 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Vps39Q8R5L3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Vps39Q8R5L3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Vps39Q8R5L3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Vps39Q8R5L3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Vps39Q8R5L3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps39Q8R5L3 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Vps39Q8R5L3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps39Q8R5L3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps39Q8R5L3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps39Q8R5L3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vps39Q8R5L3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Vps39Q8R5L3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
Vps39Q8R5L3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Vps39Q8R5L3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Vps39Q8R5L3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Vps39Q8R5L3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Vps39Q8R5L3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps39Q8R5L3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.55■■□□□ 1.04
Vps39Q8R5L3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Vps39Q8R5L3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps39Q8R5L3 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps39Q8R5L3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.55■■□□□ 1.04
Vps39Q8R5L3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps39Q8R5L3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps39Q8R5L3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps39Q8R5L3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vps39Q8R5L3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vps39Q8R5L3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Vps39Q8R5L3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.54■■□□□ 1.04
Vps39Q8R5L3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vps39Q8R5L3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vps39Q8R5L3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vps39Q8R5L3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Vps39Q8R5L3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Vps39Q8R5L3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Vps39Q8R5L3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vps39Q8R5L3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.52■■□□□ 1.04
Vps39Q8R5L3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.52■■□□□ 1.04
Vps39Q8R5L3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Vps39Q8R5L3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Vps39Q8R5L3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps39Q8R5L3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.52■■□□□ 1.04
Vps39Q8R5L3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Vps39Q8R5L3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps39Q8R5L3 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.51■■□□□ 1.03
Vps39Q8R5L3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Vps39Q8R5L3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
Vps39Q8R5L3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.51■■□□□ 1.03
Vps39Q8R5L3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vps39Q8R5L3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vps39Q8R5L3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vps39Q8R5L3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vps39Q8R5L3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.51■■□□□ 1.03
Vps39Q8R5L3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vps39Q8R5L3 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vps39Q8R5L3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.5■■□□□ 1.03
Vps39Q8R5L3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vps39Q8R5L3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vps39Q8R5L3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vps39Q8R5L3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vps39Q8R5L3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Vps39Q8R5L3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Vps39Q8R5L3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Vps39Q8R5L3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vps39Q8R5L3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vps39Q8R5L3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vps39Q8R5L3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vps39Q8R5L3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vps39Q8R5L3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.49■■□□□ 1.03
Vps39Q8R5L3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.49■■□□□ 1.03
Vps39Q8R5L3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vps39Q8R5L3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Vps39Q8R5L3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vps39Q8R5L3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.49■■□□□ 1.03
Vps39Q8R5L3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Vps39Q8R5L3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Vps39Q8R5L3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Vps39Q8R5L3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Vps39Q8R5L3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vps39Q8R5L3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vps39Q8R5L3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vps39Q8R5L3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vps39Q8R5L3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Vps39Q8R5L3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vps39Q8R5L3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vps39Q8R5L3 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.47■■□□□ 1.03
Vps39Q8R5L3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Vps39Q8R5L3 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vps39Q8R5L3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Vps39Q8R5L3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.47■■□□□ 1.03
Vps39Q8R5L3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Vps39Q8R5L3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Vps39Q8R5L3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Vps39Q8R5L3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vps39Q8R5L3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vps39Q8R5L3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms