Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Nup35Q8R4R6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup35Q8R4R6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.61■□□□□ 0.41
Nup35Q8R4R6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup35Q8R4R6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup35Q8R4R6 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Nup35Q8R4R6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nup35Q8R4R6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.61■□□□□ 0.41
Nup35Q8R4R6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.61■□□□□ 0.41
Nup35Q8R4R6 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup35Q8R4R6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup35Q8R4R6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nup35Q8R4R6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nup35Q8R4R6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Nup35Q8R4R6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup35Q8R4R6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.6■□□□□ 0.41
Nup35Q8R4R6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup35Q8R4R6 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.6■□□□□ 0.41
Nup35Q8R4R6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nup35Q8R4R6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup35Q8R4R6 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup35Q8R4R6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup35Q8R4R6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup35Q8R4R6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.6■□□□□ 0.41
Nup35Q8R4R6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup35Q8R4R6 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup35Q8R4R6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.59■□□□□ 0.41
Nup35Q8R4R6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup35Q8R4R6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup35Q8R4R6 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nup35Q8R4R6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup35Q8R4R6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup35Q8R4R6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup35Q8R4R6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup35Q8R4R6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
Nup35Q8R4R6 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Nup35Q8R4R6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup35Q8R4R6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup35Q8R4R6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup35Q8R4R6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup35Q8R4R6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Nup35Q8R4R6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.57■□□□□ 0.4
Nup35Q8R4R6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Nup35Q8R4R6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Nup35Q8R4R6 Gm6821-201ENSMUST00000107540 542 ntBASIC17.57■□□□□ 0.4
Nup35Q8R4R6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.57■□□□□ 0.4
Nup35Q8R4R6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nup35Q8R4R6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nup35Q8R4R6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nup35Q8R4R6 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.56■□□□□ 0.4
Nup35Q8R4R6 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup35Q8R4R6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup35Q8R4R6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup35Q8R4R6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup35Q8R4R6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nup35Q8R4R6 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Nup35Q8R4R6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.55■□□□□ 0.4
Nup35Q8R4R6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup35Q8R4R6 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.55■□□□□ 0.4
Nup35Q8R4R6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nup35Q8R4R6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Nup35Q8R4R6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.55■□□□□ 0.4
Nup35Q8R4R6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup35Q8R4R6 Terc-201ENSMUST00000082862 423 ntBASIC17.55■□□□□ 0.4
Nup35Q8R4R6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup35Q8R4R6 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup35Q8R4R6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup35Q8R4R6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Nup35Q8R4R6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup35Q8R4R6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.54■□□□□ 0.4
Nup35Q8R4R6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Nup35Q8R4R6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup35Q8R4R6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nup35Q8R4R6 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup35Q8R4R6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Nup35Q8R4R6 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup35Q8R4R6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup35Q8R4R6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Nup35Q8R4R6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup35Q8R4R6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nup35Q8R4R6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup35Q8R4R6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup35Q8R4R6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.53■□□□□ 0.4
Nup35Q8R4R6 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.53■□□□□ 0.4
Nup35Q8R4R6 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.53■□□□□ 0.4
Nup35Q8R4R6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup35Q8R4R6 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
Nup35Q8R4R6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup35Q8R4R6 Mir3960-201ENSMUST00000198213 73 ntBASIC17.52■□□□□ 0.4
Nup35Q8R4R6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup35Q8R4R6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nup35Q8R4R6 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nup35Q8R4R6 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Nup35Q8R4R6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nup35Q8R4R6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nup35Q8R4R6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup35Q8R4R6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Nup35Q8R4R6 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup35Q8R4R6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup35Q8R4R6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms