Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc58Q8R3Q6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc58Q8R3Q6 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.2■□□□□ 0.66
Ccdc58Q8R3Q6 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc58Q8R3Q6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc58Q8R3Q6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc58Q8R3Q6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ccdc58Q8R3Q6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc58Q8R3Q6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc58Q8R3Q6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ccdc58Q8R3Q6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc58Q8R3Q6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.19■□□□□ 0.66
Ccdc58Q8R3Q6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc58Q8R3Q6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc58Q8R3Q6 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc58Q8R3Q6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ccdc58Q8R3Q6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc58Q8R3Q6 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc58Q8R3Q6 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc58Q8R3Q6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc58Q8R3Q6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc58Q8R3Q6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc58Q8R3Q6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc58Q8R3Q6 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc58Q8R3Q6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Ccdc58Q8R3Q6 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc58Q8R3Q6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc58Q8R3Q6 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.17■□□□□ 0.66
Ccdc58Q8R3Q6 Gm9812-201ENSMUST00000061934 968 ntBASIC19.17■□□□□ 0.66
Ccdc58Q8R3Q6 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.17■□□□□ 0.66
Ccdc58Q8R3Q6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ccdc58Q8R3Q6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ccdc58Q8R3Q6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.16■□□□□ 0.66
Ccdc58Q8R3Q6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc58Q8R3Q6 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc58Q8R3Q6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Ccdc58Q8R3Q6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc58Q8R3Q6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.16■□□□□ 0.66
Ccdc58Q8R3Q6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc58Q8R3Q6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc58Q8R3Q6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc58Q8R3Q6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc58Q8R3Q6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc58Q8R3Q6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc58Q8R3Q6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc58Q8R3Q6 Gm4799-201ENSMUST00000095396 657 ntBASIC19.15■□□□□ 0.66
Ccdc58Q8R3Q6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc58Q8R3Q6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc58Q8R3Q6 Gm6821-201ENSMUST00000107540 542 ntBASIC19.14■□□□□ 0.65
Ccdc58Q8R3Q6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.14■□□□□ 0.65
Ccdc58Q8R3Q6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc58Q8R3Q6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ccdc58Q8R3Q6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc58Q8R3Q6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc58Q8R3Q6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.13■□□□□ 0.65
Ccdc58Q8R3Q6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.13■□□□□ 0.65
Ccdc58Q8R3Q6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc58Q8R3Q6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ccdc58Q8R3Q6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ccdc58Q8R3Q6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc58Q8R3Q6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc58Q8R3Q6 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc58Q8R3Q6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc58Q8R3Q6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ccdc58Q8R3Q6 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc58Q8R3Q6 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.12■□□□□ 0.65
Ccdc58Q8R3Q6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc58Q8R3Q6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
Ccdc58Q8R3Q6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.12■□□□□ 0.65
Ccdc58Q8R3Q6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc58Q8R3Q6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ccdc58Q8R3Q6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc58Q8R3Q6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc58Q8R3Q6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc58Q8R3Q6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc58Q8R3Q6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc58Q8R3Q6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.11■□□□□ 0.65
Ccdc58Q8R3Q6 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc58Q8R3Q6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc58Q8R3Q6 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.11■□□□□ 0.65
Ccdc58Q8R3Q6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc58Q8R3Q6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc58Q8R3Q6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc58Q8R3Q6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc58Q8R3Q6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc58Q8R3Q6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc58Q8R3Q6 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Ccdc58Q8R3Q6 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc58Q8R3Q6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc58Q8R3Q6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc58Q8R3Q6 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc58Q8R3Q6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc58Q8R3Q6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc58Q8R3Q6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.09■□□□□ 0.65
Ccdc58Q8R3Q6 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.09■□□□□ 0.65
Ccdc58Q8R3Q6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Ccdc58Q8R3Q6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc58Q8R3Q6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.08■□□□□ 0.65
Ccdc58Q8R3Q6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.08■□□□□ 0.65
Ccdc58Q8R3Q6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms