Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Chmp7Q8R1T1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Chmp7Q8R1T1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Chmp7Q8R1T1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Chmp7Q8R1T1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC27.96■■■□□ 2.07
Chmp7Q8R1T1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC27.95■■■□□ 2.07
Chmp7Q8R1T1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Chmp7Q8R1T1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC27.95■■■□□ 2.06
Chmp7Q8R1T1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Chmp7Q8R1T1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Chmp7Q8R1T1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC27.94■■■□□ 2.06
Chmp7Q8R1T1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC27.94■■■□□ 2.06
Chmp7Q8R1T1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Chmp7Q8R1T1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC27.94■■■□□ 2.06
Chmp7Q8R1T1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Chmp7Q8R1T1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC27.94■■■□□ 2.06
Chmp7Q8R1T1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Chmp7Q8R1T1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Chmp7Q8R1T1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Chmp7Q8R1T1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC27.93■■■□□ 2.06
Chmp7Q8R1T1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Chmp7Q8R1T1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC27.93■■■□□ 2.06
Chmp7Q8R1T1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Chmp7Q8R1T1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
Chmp7Q8R1T1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Chmp7Q8R1T1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC27.92■■■□□ 2.06
Chmp7Q8R1T1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Chmp7Q8R1T1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Chmp7Q8R1T1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Chmp7Q8R1T1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Chmp7Q8R1T1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Chmp7Q8R1T1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC27.9■■■□□ 2.06
Chmp7Q8R1T1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Chmp7Q8R1T1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Chmp7Q8R1T1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Chmp7Q8R1T1 Gm22238-201ENSMUST00000175222 88 ntBASIC27.9■■■□□ 2.06
Chmp7Q8R1T1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC27.9■■■□□ 2.06
Chmp7Q8R1T1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
Chmp7Q8R1T1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Chmp7Q8R1T1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC27.89■■■□□ 2.06
Chmp7Q8R1T1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Chmp7Q8R1T1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Chmp7Q8R1T1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Chmp7Q8R1T1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC27.89■■■□□ 2.06
Chmp7Q8R1T1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC27.89■■■□□ 2.05
Chmp7Q8R1T1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Chmp7Q8R1T1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC27.88■■■□□ 2.05
Chmp7Q8R1T1 Gm8093-201ENSMUST00000128935 1892 ntBASIC27.88■■■□□ 2.05
Chmp7Q8R1T1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Chmp7Q8R1T1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Chmp7Q8R1T1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Chmp7Q8R1T1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Chmp7Q8R1T1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Chmp7Q8R1T1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Chmp7Q8R1T1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Chmp7Q8R1T1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Chmp7Q8R1T1 Gm10399-202ENSMUST00000202768 748 ntBASIC27.86■■■□□ 2.05
Chmp7Q8R1T1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Chmp7Q8R1T1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Chmp7Q8R1T1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC27.86■■■□□ 2.05
Chmp7Q8R1T1 Gm13241-201ENSMUST00000094493 780 ntBASIC27.85■■■□□ 2.05
Chmp7Q8R1T1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC27.85■■■□□ 2.05
Chmp7Q8R1T1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC27.85■■■□□ 2.05
Chmp7Q8R1T1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.85■■■□□ 2.05
Chmp7Q8R1T1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC27.84■■■□□ 2.05
Chmp7Q8R1T1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Chmp7Q8R1T1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Chmp7Q8R1T1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Chmp7Q8R1T1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
Chmp7Q8R1T1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Chmp7Q8R1T1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Chmp7Q8R1T1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC27.81■■■□□ 2.04
Chmp7Q8R1T1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC27.81■■■□□ 2.04
Chmp7Q8R1T1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC27.81■■■□□ 2.04
Chmp7Q8R1T1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
Chmp7Q8R1T1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Chmp7Q8R1T1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Chmp7Q8R1T1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Chmp7Q8R1T1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
Chmp7Q8R1T1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Chmp7Q8R1T1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Chmp7Q8R1T1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Chmp7Q8R1T1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Chmp7Q8R1T1 Gm9847-201ENSMUST00000052528 599 ntBASIC27.8■■■□□ 2.04
Chmp7Q8R1T1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC27.79■■■□□ 2.04
Chmp7Q8R1T1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Chmp7Q8R1T1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
Chmp7Q8R1T1 Gm6934-201ENSMUST00000194780 1905 ntBASIC27.79■■■□□ 2.04
Chmp7Q8R1T1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
Chmp7Q8R1T1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Chmp7Q8R1T1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Chmp7Q8R1T1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Chmp7Q8R1T1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Chmp7Q8R1T1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Chmp7Q8R1T1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Chmp7Q8R1T1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC27.77■■■□□ 2.04
Chmp7Q8R1T1 Gm43034-201ENSMUST00000198678 1364 ntBASIC27.77■■■□□ 2.04
Chmp7Q8R1T1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Chmp7Q8R1T1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Chmp7Q8R1T1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC27.77■■■□□ 2.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms