Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Zcchc9Q8R1J3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Zcchc9Q8R1J3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.51■■□□□ 1.03
Zcchc9Q8R1J3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.51■■□□□ 1.03
Zcchc9Q8R1J3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Zcchc9Q8R1J3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Zcchc9Q8R1J3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Zcchc9Q8R1J3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Zcchc9Q8R1J3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Zcchc9Q8R1J3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Zcchc9Q8R1J3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.5■■□□□ 1.03
Zcchc9Q8R1J3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.5■■□□□ 1.03
Zcchc9Q8R1J3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Zcchc9Q8R1J3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Zcchc9Q8R1J3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Zcchc9Q8R1J3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.49■■□□□ 1.03
Zcchc9Q8R1J3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.49■■□□□ 1.03
Zcchc9Q8R1J3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Zcchc9Q8R1J3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Zcchc9Q8R1J3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Zcchc9Q8R1J3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Zcchc9Q8R1J3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Zcchc9Q8R1J3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Zcchc9Q8R1J3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Zcchc9Q8R1J3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Zcchc9Q8R1J3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Zcchc9Q8R1J3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Zcchc9Q8R1J3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Zcchc9Q8R1J3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.48■■□□□ 1.03
Zcchc9Q8R1J3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Zcchc9Q8R1J3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Zcchc9Q8R1J3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Zcchc9Q8R1J3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Zcchc9Q8R1J3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Zcchc9Q8R1J3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Zcchc9Q8R1J3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Zcchc9Q8R1J3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Zcchc9Q8R1J3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Zcchc9Q8R1J3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Zcchc9Q8R1J3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Zcchc9Q8R1J3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Zcchc9Q8R1J3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Zcchc9Q8R1J3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.45■■□□□ 1.02
Zcchc9Q8R1J3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Zcchc9Q8R1J3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.45■■□□□ 1.02
Zcchc9Q8R1J3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Zcchc9Q8R1J3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Zcchc9Q8R1J3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Zcchc9Q8R1J3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.44■■□□□ 1.02
Zcchc9Q8R1J3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Zcchc9Q8R1J3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Zcchc9Q8R1J3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Zcchc9Q8R1J3 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Zcchc9Q8R1J3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Zcchc9Q8R1J3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Zcchc9Q8R1J3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Zcchc9Q8R1J3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Zcchc9Q8R1J3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Zcchc9Q8R1J3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Zcchc9Q8R1J3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Zcchc9Q8R1J3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Zcchc9Q8R1J3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Zcchc9Q8R1J3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.43■■□□□ 1.02
Zcchc9Q8R1J3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.43■■□□□ 1.02
Zcchc9Q8R1J3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Zcchc9Q8R1J3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.43■■□□□ 1.02
Zcchc9Q8R1J3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Zcchc9Q8R1J3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Zcchc9Q8R1J3 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.42■■□□□ 1.02
Zcchc9Q8R1J3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Zcchc9Q8R1J3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Zcchc9Q8R1J3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Zcchc9Q8R1J3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Zcchc9Q8R1J3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Zcchc9Q8R1J3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Zcchc9Q8R1J3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Zcchc9Q8R1J3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Zcchc9Q8R1J3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Zcchc9Q8R1J3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Zcchc9Q8R1J3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Zcchc9Q8R1J3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
Zcchc9Q8R1J3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.4■■□□□ 1.02
Zcchc9Q8R1J3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.4■■□□□ 1.02
Zcchc9Q8R1J3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Zcchc9Q8R1J3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Zcchc9Q8R1J3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Zcchc9Q8R1J3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Zcchc9Q8R1J3 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.39■■□□□ 1.01
Zcchc9Q8R1J3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
Zcchc9Q8R1J3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Zcchc9Q8R1J3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Zcchc9Q8R1J3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Zcchc9Q8R1J3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Zcchc9Q8R1J3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.38■■□□□ 1.01
Zcchc9Q8R1J3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.38■■□□□ 1.01
Zcchc9Q8R1J3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Zcchc9Q8R1J3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Zcchc9Q8R1J3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Zcchc9Q8R1J3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Zcchc9Q8R1J3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms