Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Alms1Q8K4E0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Alms1Q8K4E0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Alms1Q8K4E0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Alms1Q8K4E0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.37■■□□□ 1.01
Alms1Q8K4E0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Alms1Q8K4E0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Alms1Q8K4E0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Alms1Q8K4E0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Alms1Q8K4E0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Alms1Q8K4E0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Alms1Q8K4E0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Alms1Q8K4E0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.36■■□□□ 1.01
Alms1Q8K4E0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Alms1Q8K4E0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Alms1Q8K4E0 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.35■■□□□ 1.01
Alms1Q8K4E0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Alms1Q8K4E0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.35■■□□□ 1.01
Alms1Q8K4E0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Alms1Q8K4E0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Alms1Q8K4E0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
Alms1Q8K4E0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Alms1Q8K4E0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.34■■□□□ 1.01
Alms1Q8K4E0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Alms1Q8K4E0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Alms1Q8K4E0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Alms1Q8K4E0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Alms1Q8K4E0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Alms1Q8K4E0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Alms1Q8K4E0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Alms1Q8K4E0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Alms1Q8K4E0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.32■■□□□ 1
Alms1Q8K4E0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.32■■□□□ 1
Alms1Q8K4E0 Gm9847-201ENSMUST00000052528 599 ntBASIC21.32■■□□□ 1
Alms1Q8K4E0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Alms1Q8K4E0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.31■■□□□ 1
Alms1Q8K4E0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Alms1Q8K4E0 Gm12922-201ENSMUST00000120626 809 ntBASIC21.31■■□□□ 1
Alms1Q8K4E0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Alms1Q8K4E0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Alms1Q8K4E0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.3■■□□□ 1
Alms1Q8K4E0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Alms1Q8K4E0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Alms1Q8K4E0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.3■■□□□ 1
Alms1Q8K4E0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.3■■□□□ 1
Alms1Q8K4E0 Gm7417-201ENSMUST00000192950 473 ntBASIC21.3■■□□□ 1
Alms1Q8K4E0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Alms1Q8K4E0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Alms1Q8K4E0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.28■■□□□ 1
Alms1Q8K4E0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.28■■□□□ 1
Alms1Q8K4E0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Alms1Q8K4E0 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.28■■□□□ 1
Alms1Q8K4E0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Alms1Q8K4E0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.28■■□□□ 1
Alms1Q8K4E0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Alms1Q8K4E0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.28■■□□□ 1
Alms1Q8K4E0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.28■■□□□ 1
Alms1Q8K4E0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.28■■□□□ 1
Alms1Q8K4E0 Gm22238-201ENSMUST00000175222 88 ntBASIC21.28■■□□□ 1
Alms1Q8K4E0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Alms1Q8K4E0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.28■■□□□ 1
Alms1Q8K4E0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Alms1Q8K4E0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.27■■□□□ 1
Alms1Q8K4E0 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Alms1Q8K4E0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Alms1Q8K4E0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.27■■□□□ 1
Alms1Q8K4E0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Alms1Q8K4E0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Alms1Q8K4E0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Alms1Q8K4E0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Alms1Q8K4E0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Alms1Q8K4E0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.25■□□□□ 0.99
Alms1Q8K4E0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Alms1Q8K4E0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Alms1Q8K4E0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Alms1Q8K4E0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Alms1Q8K4E0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Alms1Q8K4E0 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.24■□□□□ 0.99
Alms1Q8K4E0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.24■□□□□ 0.99
Alms1Q8K4E0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.23■□□□□ 0.99
Alms1Q8K4E0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Alms1Q8K4E0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.23■□□□□ 0.99
Alms1Q8K4E0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.23■□□□□ 0.99
Alms1Q8K4E0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Alms1Q8K4E0 Gm27454-201ENSMUST00000185090 204 ntBASIC21.23■□□□□ 0.99
Alms1Q8K4E0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Alms1Q8K4E0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Alms1Q8K4E0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Alms1Q8K4E0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.22■□□□□ 0.99
Alms1Q8K4E0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Alms1Q8K4E0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Alms1Q8K4E0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Alms1Q8K4E0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Alms1Q8K4E0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.22■□□□□ 0.99
Alms1Q8K4E0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Alms1Q8K4E0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
Alms1Q8K4E0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Alms1Q8K4E0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Alms1Q8K4E0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Alms1Q8K4E0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms