Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cystm1Q8K353 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cystm1Q8K353 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cystm1Q8K353 Gm43182-201ENSMUST00000199476 2528 ntBASIC13.48□□□□□ -0.25
Cystm1Q8K353 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cystm1Q8K353 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cystm1Q8K353 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cystm1Q8K353 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cystm1Q8K353 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cystm1Q8K353 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
Cystm1Q8K353 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cystm1Q8K353 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC13.47□□□□□ -0.25
Cystm1Q8K353 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC13.47□□□□□ -0.25
Cystm1Q8K353 AC131739.1-201ENSMUST00000221692 1245 ntBASIC13.47□□□□□ -0.25
Cystm1Q8K353 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cystm1Q8K353 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cystm1Q8K353 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cystm1Q8K353 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cystm1Q8K353 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cystm1Q8K353 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cystm1Q8K353 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cystm1Q8K353 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cystm1Q8K353 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cystm1Q8K353 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cystm1Q8K353 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cystm1Q8K353 Gm5112-201ENSMUST00000204407 2368 ntBASIC13.46□□□□□ -0.25
Cystm1Q8K353 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cystm1Q8K353 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cystm1Q8K353 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cystm1Q8K353 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cystm1Q8K353 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cystm1Q8K353 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cystm1Q8K353 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Cystm1Q8K353 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cystm1Q8K353 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cystm1Q8K353 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cystm1Q8K353 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Cystm1Q8K353 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Cystm1Q8K353 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cystm1Q8K353 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cystm1Q8K353 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cystm1Q8K353 AC153962.1-201ENSMUST00000218530 1948 ntBASIC13.44□□□□□ -0.26
Cystm1Q8K353 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
Cystm1Q8K353 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cystm1Q8K353 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cystm1Q8K353 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cystm1Q8K353 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cystm1Q8K353 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Cystm1Q8K353 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cystm1Q8K353 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cystm1Q8K353 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cystm1Q8K353 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC13.42□□□□□ -0.26
Cystm1Q8K353 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cystm1Q8K353 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cystm1Q8K353 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cystm1Q8K353 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cystm1Q8K353 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cystm1Q8K353 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cystm1Q8K353 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cystm1Q8K353 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cystm1Q8K353 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cystm1Q8K353 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cystm1Q8K353 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cystm1Q8K353 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cystm1Q8K353 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cystm1Q8K353 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC13.4□□□□□ -0.26
Cystm1Q8K353 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cystm1Q8K353 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cystm1Q8K353 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC13.4□□□□□ -0.26
Cystm1Q8K353 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cystm1Q8K353 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cystm1Q8K353 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cystm1Q8K353 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cystm1Q8K353 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cystm1Q8K353 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cystm1Q8K353 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cystm1Q8K353 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cystm1Q8K353 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cystm1Q8K353 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cystm1Q8K353 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC13.39□□□□□ -0.27
Cystm1Q8K353 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cystm1Q8K353 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cystm1Q8K353 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cystm1Q8K353 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cystm1Q8K353 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cystm1Q8K353 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cystm1Q8K353 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cystm1Q8K353 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cystm1Q8K353 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cystm1Q8K353 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cystm1Q8K353 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cystm1Q8K353 Particl-201ENSMUST00000205370 1560 ntBASIC13.38□□□□□ -0.27
Cystm1Q8K353 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cystm1Q8K353 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC13.38□□□□□ -0.27
Cystm1Q8K353 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC13.38□□□□□ -0.27
Cystm1Q8K353 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cystm1Q8K353 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cystm1Q8K353 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cystm1Q8K353 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cystm1Q8K353 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms