Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmgcs1Q8JZK9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmgcs1Q8JZK9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Hmgcs1Q8JZK9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.6■□□□□ 0.89
Hmgcs1Q8JZK9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.6■□□□□ 0.89
Hmgcs1Q8JZK9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmgcs1Q8JZK9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmgcs1Q8JZK9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmgcs1Q8JZK9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmgcs1Q8JZK9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.59■□□□□ 0.89
Hmgcs1Q8JZK9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hmgcs1Q8JZK9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hmgcs1Q8JZK9 Gm11687-201ENSMUST00000118911 886 ntBASIC20.59■□□□□ 0.89
Hmgcs1Q8JZK9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.59■□□□□ 0.89
Hmgcs1Q8JZK9 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.59■□□□□ 0.89
Hmgcs1Q8JZK9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Hmgcs1Q8JZK9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmgcs1Q8JZK9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmgcs1Q8JZK9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hmgcs1Q8JZK9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hmgcs1Q8JZK9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hmgcs1Q8JZK9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hmgcs1Q8JZK9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Hmgcs1Q8JZK9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hmgcs1Q8JZK9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.57■□□□□ 0.88
Hmgcs1Q8JZK9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hmgcs1Q8JZK9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmgcs1Q8JZK9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmgcs1Q8JZK9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmgcs1Q8JZK9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmgcs1Q8JZK9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmgcs1Q8JZK9 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.56■□□□□ 0.88
Hmgcs1Q8JZK9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmgcs1Q8JZK9 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.56■□□□□ 0.88
Hmgcs1Q8JZK9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Hmgcs1Q8JZK9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hmgcs1Q8JZK9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmgcs1Q8JZK9 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmgcs1Q8JZK9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Hmgcs1Q8JZK9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmgcs1Q8JZK9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Hmgcs1Q8JZK9 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.54■□□□□ 0.88
Hmgcs1Q8JZK9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hmgcs1Q8JZK9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Hmgcs1Q8JZK9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hmgcs1Q8JZK9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hmgcs1Q8JZK9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Hmgcs1Q8JZK9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hmgcs1Q8JZK9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hmgcs1Q8JZK9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.54■□□□□ 0.88
Hmgcs1Q8JZK9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.54■□□□□ 0.88
Hmgcs1Q8JZK9 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.54■□□□□ 0.88
Hmgcs1Q8JZK9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Hmgcs1Q8JZK9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
Hmgcs1Q8JZK9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hmgcs1Q8JZK9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hmgcs1Q8JZK9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hmgcs1Q8JZK9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmgcs1Q8JZK9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hmgcs1Q8JZK9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmgcs1Q8JZK9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.52■□□□□ 0.88
Hmgcs1Q8JZK9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmgcs1Q8JZK9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmgcs1Q8JZK9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hmgcs1Q8JZK9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.52■□□□□ 0.87
Hmgcs1Q8JZK9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.51■□□□□ 0.87
Hmgcs1Q8JZK9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.51■□□□□ 0.87
Hmgcs1Q8JZK9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmgcs1Q8JZK9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmgcs1Q8JZK9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmgcs1Q8JZK9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmgcs1Q8JZK9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmgcs1Q8JZK9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmgcs1Q8JZK9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Hmgcs1Q8JZK9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmgcs1Q8JZK9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmgcs1Q8JZK9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.49■□□□□ 0.87
Hmgcs1Q8JZK9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hmgcs1Q8JZK9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmgcs1Q8JZK9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Hmgcs1Q8JZK9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Hmgcs1Q8JZK9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Hmgcs1Q8JZK9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Hmgcs1Q8JZK9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hmgcs1Q8JZK9 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hmgcs1Q8JZK9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgcs1Q8JZK9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgcs1Q8JZK9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgcs1Q8JZK9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgcs1Q8JZK9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgcs1Q8JZK9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgcs1Q8JZK9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Hmgcs1Q8JZK9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.45■□□□□ 0.87
Hmgcs1Q8JZK9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgcs1Q8JZK9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgcs1Q8JZK9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgcs1Q8JZK9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgcs1Q8JZK9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgcs1Q8JZK9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgcs1Q8JZK9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms