Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfwd3Q8CIK8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfwd3Q8CIK8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rfwd3Q8CIK8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Rfwd3Q8CIK8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rfwd3Q8CIK8 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfwd3Q8CIK8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfwd3Q8CIK8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Rfwd3Q8CIK8 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfwd3Q8CIK8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Rfwd3Q8CIK8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.21■□□□□ 0.83
Rfwd3Q8CIK8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rfwd3Q8CIK8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Rfwd3Q8CIK8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.2■□□□□ 0.82
Rfwd3Q8CIK8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rfwd3Q8CIK8 Gm22567-201ENSMUST00000175542 342 ntBASIC20.2■□□□□ 0.82
Rfwd3Q8CIK8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.2■□□□□ 0.82
Rfwd3Q8CIK8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rfwd3Q8CIK8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rfwd3Q8CIK8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Rfwd3Q8CIK8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfwd3Q8CIK8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfwd3Q8CIK8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.19■□□□□ 0.82
Rfwd3Q8CIK8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Rfwd3Q8CIK8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfwd3Q8CIK8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Rfwd3Q8CIK8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Rfwd3Q8CIK8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfwd3Q8CIK8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.18■□□□□ 0.82
Rfwd3Q8CIK8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rfwd3Q8CIK8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Rfwd3Q8CIK8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfwd3Q8CIK8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Rfwd3Q8CIK8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfwd3Q8CIK8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfwd3Q8CIK8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfwd3Q8CIK8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfwd3Q8CIK8 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Rfwd3Q8CIK8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.17■□□□□ 0.82
Rfwd3Q8CIK8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rfwd3Q8CIK8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfwd3Q8CIK8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfwd3Q8CIK8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfwd3Q8CIK8 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfwd3Q8CIK8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfwd3Q8CIK8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.16■□□□□ 0.82
Rfwd3Q8CIK8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rfwd3Q8CIK8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfwd3Q8CIK8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Rfwd3Q8CIK8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfwd3Q8CIK8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfwd3Q8CIK8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfwd3Q8CIK8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.15■□□□□ 0.82
Rfwd3Q8CIK8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfwd3Q8CIK8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.15■□□□□ 0.82
Rfwd3Q8CIK8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfwd3Q8CIK8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rfwd3Q8CIK8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfwd3Q8CIK8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Rfwd3Q8CIK8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Rfwd3Q8CIK8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfwd3Q8CIK8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfwd3Q8CIK8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfwd3Q8CIK8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rfwd3Q8CIK8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfwd3Q8CIK8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfwd3Q8CIK8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.13■□□□□ 0.81
Rfwd3Q8CIK8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Rfwd3Q8CIK8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Rfwd3Q8CIK8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.12■□□□□ 0.81
Rfwd3Q8CIK8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rfwd3Q8CIK8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rfwd3Q8CIK8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rfwd3Q8CIK8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rfwd3Q8CIK8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfwd3Q8CIK8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfwd3Q8CIK8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfwd3Q8CIK8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfwd3Q8CIK8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfwd3Q8CIK8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.11■□□□□ 0.81
Rfwd3Q8CIK8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfwd3Q8CIK8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfwd3Q8CIK8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfwd3Q8CIK8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfwd3Q8CIK8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfwd3Q8CIK8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.1■□□□□ 0.81
Rfwd3Q8CIK8 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfwd3Q8CIK8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Rfwd3Q8CIK8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rfwd3Q8CIK8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rfwd3Q8CIK8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfwd3Q8CIK8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfwd3Q8CIK8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfwd3Q8CIK8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.09■□□□□ 0.81
Rfwd3Q8CIK8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfwd3Q8CIK8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfwd3Q8CIK8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Rfwd3Q8CIK8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Rfwd3Q8CIK8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfwd3Q8CIK8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms