Protein–RNA interactions for Protein: Q8CGP4

Hist1h2aa, Histone H2A, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aaQ8CGP4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.27■□□□□ 0.84
Hist1h2aaQ8CGP4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Hist1h2aaQ8CGP4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Hist1h2aaQ8CGP4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.27■□□□□ 0.84
Hist1h2aaQ8CGP4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Hist1h2aaQ8CGP4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Hist1h2aaQ8CGP4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Hist1h2aaQ8CGP4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hist1h2aaQ8CGP4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Hist1h2aaQ8CGP4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hist1h2aaQ8CGP4 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hist1h2aaQ8CGP4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hist1h2aaQ8CGP4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hist1h2aaQ8CGP4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hist1h2aaQ8CGP4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hist1h2aaQ8CGP4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hist1h2aaQ8CGP4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.25■□□□□ 0.83
Hist1h2aaQ8CGP4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hist1h2aaQ8CGP4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.25■□□□□ 0.83
Hist1h2aaQ8CGP4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Hist1h2aaQ8CGP4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hist1h2aaQ8CGP4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hist1h2aaQ8CGP4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.25■□□□□ 0.83
Hist1h2aaQ8CGP4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hist1h2aaQ8CGP4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hist1h2aaQ8CGP4 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hist1h2aaQ8CGP4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Hist1h2aaQ8CGP4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.24■□□□□ 0.83
Hist1h2aaQ8CGP4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hist1h2aaQ8CGP4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Hist1h2aaQ8CGP4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hist1h2aaQ8CGP4 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hist1h2aaQ8CGP4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hist1h2aaQ8CGP4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hist1h2aaQ8CGP4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hist1h2aaQ8CGP4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hist1h2aaQ8CGP4 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Hist1h2aaQ8CGP4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hist1h2aaQ8CGP4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hist1h2aaQ8CGP4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Hist1h2aaQ8CGP4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hist1h2aaQ8CGP4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hist1h2aaQ8CGP4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.22■□□□□ 0.83
Hist1h2aaQ8CGP4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hist1h2aaQ8CGP4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Hist1h2aaQ8CGP4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hist1h2aaQ8CGP4 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hist1h2aaQ8CGP4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hist1h2aaQ8CGP4 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hist1h2aaQ8CGP4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hist1h2aaQ8CGP4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hist1h2aaQ8CGP4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hist1h2aaQ8CGP4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Hist1h2aaQ8CGP4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hist1h2aaQ8CGP4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Hist1h2aaQ8CGP4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Hist1h2aaQ8CGP4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hist1h2aaQ8CGP4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hist1h2aaQ8CGP4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hist1h2aaQ8CGP4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hist1h2aaQ8CGP4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hist1h2aaQ8CGP4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hist1h2aaQ8CGP4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hist1h2aaQ8CGP4 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hist1h2aaQ8CGP4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Hist1h2aaQ8CGP4 Cap2-205ENSMUST00000225824 1634 ntBASIC20.19■□□□□ 0.82
Hist1h2aaQ8CGP4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Hist1h2aaQ8CGP4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hist1h2aaQ8CGP4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Hist1h2aaQ8CGP4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hist1h2aaQ8CGP4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Hist1h2aaQ8CGP4 Gm10420-201ENSMUST00000121713 882 ntBASIC20.18■□□□□ 0.82
Hist1h2aaQ8CGP4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.18■□□□□ 0.82
Hist1h2aaQ8CGP4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hist1h2aaQ8CGP4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Hist1h2aaQ8CGP4 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hist1h2aaQ8CGP4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Hist1h2aaQ8CGP4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hist1h2aaQ8CGP4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hist1h2aaQ8CGP4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hist1h2aaQ8CGP4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Hist1h2aaQ8CGP4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hist1h2aaQ8CGP4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hist1h2aaQ8CGP4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hist1h2aaQ8CGP4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hist1h2aaQ8CGP4 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hist1h2aaQ8CGP4 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hist1h2aaQ8CGP4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hist1h2aaQ8CGP4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hist1h2aaQ8CGP4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Hist1h2aaQ8CGP4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Hist1h2aaQ8CGP4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hist1h2aaQ8CGP4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hist1h2aaQ8CGP4 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hist1h2aaQ8CGP4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hist1h2aaQ8CGP4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Hist1h2aaQ8CGP4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hist1h2aaQ8CGP4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Hist1h2aaQ8CGP4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Hist1h2aaQ8CGP4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms