Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Nsd1-206ENSMUST00000224918 1001 ntBASIC26.75■■□□□ 1.87
Smc4Q8CG47 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Smc4Q8CG47 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
Smc4Q8CG47 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Smc4Q8CG47 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Smc4Q8CG47 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Smc4Q8CG47 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
Smc4Q8CG47 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Smc4Q8CG47 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Smc4Q8CG47 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Smc4Q8CG47 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC26.73■■□□□ 1.87
Smc4Q8CG47 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Smc4Q8CG47 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Smc4Q8CG47 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Smc4Q8CG47 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Smc4Q8CG47 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Smc4Q8CG47 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Smc4Q8CG47 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Smc4Q8CG47 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Smc4Q8CG47 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Smc4Q8CG47 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Smc4Q8CG47 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC26.72■■□□□ 1.87
Smc4Q8CG47 Gm45102-201ENSMUST00000207427 857 ntBASIC26.72■■□□□ 1.87
Smc4Q8CG47 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Smc4Q8CG47 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Smc4Q8CG47 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Smc4Q8CG47 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Smc4Q8CG47 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
Smc4Q8CG47 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC26.71■■□□□ 1.87
Smc4Q8CG47 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC26.69■■□□□ 1.86
Smc4Q8CG47 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Smc4Q8CG47 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Smc4Q8CG47 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Smc4Q8CG47 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Smc4Q8CG47 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC26.69■■□□□ 1.86
Smc4Q8CG47 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Smc4Q8CG47 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
Smc4Q8CG47 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC26.68■■□□□ 1.86
Smc4Q8CG47 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Smc4Q8CG47 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Smc4Q8CG47 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Smc4Q8CG47 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Smc4Q8CG47 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC26.67■■□□□ 1.86
Smc4Q8CG47 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC26.67■■□□□ 1.86
Smc4Q8CG47 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Smc4Q8CG47 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Smc4Q8CG47 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Smc4Q8CG47 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Smc4Q8CG47 Gm11847-201ENSMUST00000125165 1119 ntBASIC26.66■■□□□ 1.86
Smc4Q8CG47 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC26.66■■□□□ 1.86
Smc4Q8CG47 Gm9959-201ENSMUST00000068277 390 ntBASIC26.66■■□□□ 1.86
Smc4Q8CG47 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC26.66■■□□□ 1.86
Smc4Q8CG47 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Smc4Q8CG47 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
Smc4Q8CG47 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Smc4Q8CG47 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC26.66■■□□□ 1.86
Smc4Q8CG47 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
Smc4Q8CG47 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Smc4Q8CG47 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Smc4Q8CG47 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Smc4Q8CG47 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Smc4Q8CG47 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC26.64■■□□□ 1.86
Smc4Q8CG47 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC26.64■■□□□ 1.86
Smc4Q8CG47 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Smc4Q8CG47 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
Smc4Q8CG47 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Smc4Q8CG47 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Smc4Q8CG47 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
Smc4Q8CG47 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC26.63■■□□□ 1.85
Smc4Q8CG47 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Smc4Q8CG47 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Smc4Q8CG47 Gm14117-201ENSMUST00000122417 843 ntBASIC26.62■■□□□ 1.85
Smc4Q8CG47 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC26.62■■□□□ 1.85
Smc4Q8CG47 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Smc4Q8CG47 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
Smc4Q8CG47 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Smc4Q8CG47 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
Smc4Q8CG47 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Smc4Q8CG47 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Smc4Q8CG47 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Smc4Q8CG47 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
Smc4Q8CG47 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Smc4Q8CG47 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Smc4Q8CG47 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Smc4Q8CG47 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC26.6■■□□□ 1.85
Smc4Q8CG47 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Smc4Q8CG47 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Smc4Q8CG47 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
Smc4Q8CG47 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Smc4Q8CG47 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Smc4Q8CG47 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Smc4Q8CG47 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Smc4Q8CG47 Etf1-202ENSMUST00000180351 108 ntBASIC26.59■■□□□ 1.85
Smc4Q8CG47 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC26.58■■□□□ 1.85
Smc4Q8CG47 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Smc4Q8CG47 Il17rd-202ENSMUST00000223942 2186 ntBASIC26.58■■□□□ 1.85
Smc4Q8CG47 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Smc4Q8CG47 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Smc4Q8CG47 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Smc4Q8CG47 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms