Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.56■■□□□ 1.04
Pcdhb7Q8CDY9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb7Q8CDY9 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.56■■□□□ 1.04
Pcdhb7Q8CDY9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb7Q8CDY9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb7Q8CDY9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb7Q8CDY9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb7Q8CDY9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb7Q8CDY9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb7Q8CDY9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb7Q8CDY9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.55■■□□□ 1.04
Pcdhb7Q8CDY9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb7Q8CDY9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb7Q8CDY9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb7Q8CDY9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.54■■□□□ 1.04
Pcdhb7Q8CDY9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Pcdhb7Q8CDY9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb7Q8CDY9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.54■■□□□ 1.04
Pcdhb7Q8CDY9 Mir6538-201ENSMUST00000183713 110 ntBASIC21.54■■□□□ 1.04
Pcdhb7Q8CDY9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.54■■□□□ 1.04
Pcdhb7Q8CDY9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.54■■□□□ 1.04
Pcdhb7Q8CDY9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb7Q8CDY9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb7Q8CDY9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb7Q8CDY9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb7Q8CDY9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb7Q8CDY9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb7Q8CDY9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Pcdhb7Q8CDY9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.53■■□□□ 1.04
Pcdhb7Q8CDY9 Gm27502-201ENSMUST00000183495 199 ntBASIC21.52■■□□□ 1.04
Pcdhb7Q8CDY9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb7Q8CDY9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Pcdhb7Q8CDY9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb7Q8CDY9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb7Q8CDY9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Pcdhb7Q8CDY9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb7Q8CDY9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb7Q8CDY9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb7Q8CDY9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.5■■□□□ 1.03
Pcdhb7Q8CDY9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.5■■□□□ 1.03
Pcdhb7Q8CDY9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb7Q8CDY9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Pcdhb7Q8CDY9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb7Q8CDY9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb7Q8CDY9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb7Q8CDY9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb7Q8CDY9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb7Q8CDY9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Pcdhb7Q8CDY9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb7Q8CDY9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb7Q8CDY9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb7Q8CDY9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb7Q8CDY9 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb7Q8CDY9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb7Q8CDY9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb7Q8CDY9 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb7Q8CDY9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Pcdhb7Q8CDY9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Pcdhb7Q8CDY9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb7Q8CDY9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb7Q8CDY9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb7Q8CDY9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.48■■□□□ 1.03
Pcdhb7Q8CDY9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.48■■□□□ 1.03
Pcdhb7Q8CDY9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Pcdhb7Q8CDY9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb7Q8CDY9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Pcdhb7Q8CDY9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb7Q8CDY9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb7Q8CDY9 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.47■■□□□ 1.03
Pcdhb7Q8CDY9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Pcdhb7Q8CDY9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Pcdhb7Q8CDY9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb7Q8CDY9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb7Q8CDY9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb7Q8CDY9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb7Q8CDY9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.46■■□□□ 1.03
Pcdhb7Q8CDY9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Pcdhb7Q8CDY9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb7Q8CDY9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb7Q8CDY9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb7Q8CDY9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Pcdhb7Q8CDY9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb7Q8CDY9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb7Q8CDY9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.45■■□□□ 1.02
Pcdhb7Q8CDY9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb7Q8CDY9 Gm14523-201ENSMUST00000117260 558 ntBASIC21.45■■□□□ 1.02
Pcdhb7Q8CDY9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.45■■□□□ 1.02
Pcdhb7Q8CDY9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.45■■□□□ 1.02
Pcdhb7Q8CDY9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb7Q8CDY9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Pcdhb7Q8CDY9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb7Q8CDY9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb7Q8CDY9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb7Q8CDY9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb7Q8CDY9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.44■■□□□ 1.02
Pcdhb7Q8CDY9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb7Q8CDY9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Pcdhb7Q8CDY9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
Pcdhb7Q8CDY9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb7Q8CDY9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms