Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
Trim52Q8CDV4 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Trim52Q8CDV4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Trim52Q8CDV4 Gm11847-201ENSMUST00000125165 1119 ntBASIC27.2■■□□□ 1.94
Trim52Q8CDV4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Trim52Q8CDV4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Trim52Q8CDV4 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC27.2■■□□□ 1.94
Trim52Q8CDV4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Trim52Q8CDV4 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Trim52Q8CDV4 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Trim52Q8CDV4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC27.19■■□□□ 1.94
Trim52Q8CDV4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC27.19■■□□□ 1.94
Trim52Q8CDV4 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC27.19■■□□□ 1.94
Trim52Q8CDV4 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Trim52Q8CDV4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC27.18■■□□□ 1.94
Trim52Q8CDV4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
Trim52Q8CDV4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC27.17■■□□□ 1.94
Trim52Q8CDV4 Gm7417-201ENSMUST00000192950 473 ntBASIC27.17■■□□□ 1.94
Trim52Q8CDV4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Trim52Q8CDV4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Trim52Q8CDV4 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Trim52Q8CDV4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
Trim52Q8CDV4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
Trim52Q8CDV4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC27.16■■□□□ 1.94
Trim52Q8CDV4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC27.16■■□□□ 1.94
Trim52Q8CDV4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC27.16■■□□□ 1.94
Trim52Q8CDV4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Trim52Q8CDV4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Trim52Q8CDV4 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Trim52Q8CDV4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Trim52Q8CDV4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Trim52Q8CDV4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
Trim52Q8CDV4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Trim52Q8CDV4 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Trim52Q8CDV4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC27.14■■□□□ 1.94
Trim52Q8CDV4 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC27.14■■□□□ 1.94
Trim52Q8CDV4 Gm40881-201ENSMUST00000223397 166 ntBASIC27.14■■□□□ 1.94
Trim52Q8CDV4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Trim52Q8CDV4 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.93
Trim52Q8CDV4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
Trim52Q8CDV4 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Trim52Q8CDV4 Gm8093-201ENSMUST00000128935 1892 ntBASIC27.13■■□□□ 1.93
Trim52Q8CDV4 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC27.13■■□□□ 1.93
Trim52Q8CDV4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Trim52Q8CDV4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Trim52Q8CDV4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC27.12■■□□□ 1.93
Trim52Q8CDV4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Trim52Q8CDV4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Trim52Q8CDV4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Trim52Q8CDV4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Trim52Q8CDV4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC27.11■■□□□ 1.93
Trim52Q8CDV4 Gm15039-201ENSMUST00000118914 875 ntBASIC27.11■■□□□ 1.93
Trim52Q8CDV4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
Trim52Q8CDV4 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Trim52Q8CDV4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Trim52Q8CDV4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC27.1■■□□□ 1.93
Trim52Q8CDV4 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Trim52Q8CDV4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
Trim52Q8CDV4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Trim52Q8CDV4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Trim52Q8CDV4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Trim52Q8CDV4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Trim52Q8CDV4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Trim52Q8CDV4 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Trim52Q8CDV4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Trim52Q8CDV4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Trim52Q8CDV4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Trim52Q8CDV4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Trim52Q8CDV4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
Trim52Q8CDV4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Trim52Q8CDV4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC27.09■■□□□ 1.93
Trim52Q8CDV4 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Trim52Q8CDV4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC27.08■■□□□ 1.93
Trim52Q8CDV4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Trim52Q8CDV4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
Trim52Q8CDV4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
Trim52Q8CDV4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Trim52Q8CDV4 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Trim52Q8CDV4 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
Trim52Q8CDV4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Trim52Q8CDV4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC27.06■■□□□ 1.92
Trim52Q8CDV4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Trim52Q8CDV4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Trim52Q8CDV4 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC27.06■■□□□ 1.92
Trim52Q8CDV4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Trim52Q8CDV4 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Trim52Q8CDV4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC27.06■■□□□ 1.92
Trim52Q8CDV4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Trim52Q8CDV4 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Trim52Q8CDV4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC27.05■■□□□ 1.92
Trim52Q8CDV4 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Trim52Q8CDV4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Trim52Q8CDV4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Trim52Q8CDV4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Trim52Q8CDV4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Trim52Q8CDV4 Gm10399-202ENSMUST00000202768 748 ntBASIC27.04■■□□□ 1.92
Trim52Q8CDV4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC27.04■■□□□ 1.92
Trim52Q8CDV4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC27.04■■□□□ 1.92
Trim52Q8CDV4 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Trim52Q8CDV4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms