Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Eri3Q8C460 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Eri3Q8C460 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Eri3Q8C460 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Eri3Q8C460 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.51■□□□□ 0.87
Eri3Q8C460 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.51■□□□□ 0.87
Eri3Q8C460 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Eri3Q8C460 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Eri3Q8C460 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Eri3Q8C460 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Eri3Q8C460 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Eri3Q8C460 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Eri3Q8C460 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.5■□□□□ 0.87
Eri3Q8C460 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Eri3Q8C460 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Eri3Q8C460 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Eri3Q8C460 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Eri3Q8C460 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Eri3Q8C460 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.49■□□□□ 0.87
Eri3Q8C460 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Eri3Q8C460 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Eri3Q8C460 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Eri3Q8C460 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Eri3Q8C460 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Eri3Q8C460 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Eri3Q8C460 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Eri3Q8C460 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Eri3Q8C460 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Eri3Q8C460 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Eri3Q8C460 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Eri3Q8C460 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Eri3Q8C460 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Eri3Q8C460 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Eri3Q8C460 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Eri3Q8C460 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Eri3Q8C460 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Eri3Q8C460 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Eri3Q8C460 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.47■□□□□ 0.87
Eri3Q8C460 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Eri3Q8C460 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Eri3Q8C460 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Eri3Q8C460 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Eri3Q8C460 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Eri3Q8C460 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Eri3Q8C460 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Eri3Q8C460 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Eri3Q8C460 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Eri3Q8C460 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Eri3Q8C460 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Eri3Q8C460 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Eri3Q8C460 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Eri3Q8C460 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Eri3Q8C460 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Eri3Q8C460 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Eri3Q8C460 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Eri3Q8C460 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
Eri3Q8C460 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Eri3Q8C460 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Eri3Q8C460 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Eri3Q8C460 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Eri3Q8C460 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Eri3Q8C460 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Eri3Q8C460 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Eri3Q8C460 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Eri3Q8C460 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Eri3Q8C460 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Eri3Q8C460 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Eri3Q8C460 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Eri3Q8C460 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.43■□□□□ 0.86
Eri3Q8C460 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Eri3Q8C460 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Eri3Q8C460 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Eri3Q8C460 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Eri3Q8C460 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Eri3Q8C460 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Eri3Q8C460 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Eri3Q8C460 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Eri3Q8C460 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Eri3Q8C460 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Eri3Q8C460 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Eri3Q8C460 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Eri3Q8C460 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Eri3Q8C460 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Eri3Q8C460 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Eri3Q8C460 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Eri3Q8C460 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Eri3Q8C460 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Eri3Q8C460 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Eri3Q8C460 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Eri3Q8C460 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Eri3Q8C460 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Eri3Q8C460 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Eri3Q8C460 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Eri3Q8C460 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.4■□□□□ 0.86
Eri3Q8C460 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.4■□□□□ 0.86
Eri3Q8C460 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.4■□□□□ 0.86
Eri3Q8C460 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.4■□□□□ 0.86
Eri3Q8C460 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Eri3Q8C460 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Eri3Q8C460 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms