Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cpne1Q8C166 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Cpne1Q8C166 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpne1Q8C166 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpne1Q8C166 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Cpne1Q8C166 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpne1Q8C166 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpne1Q8C166 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Cpne1Q8C166 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cpne1Q8C166 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.15■□□□□ 0.82
Cpne1Q8C166 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.15■□□□□ 0.82
Cpne1Q8C166 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpne1Q8C166 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpne1Q8C166 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Cpne1Q8C166 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cpne1Q8C166 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cpne1Q8C166 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cpne1Q8C166 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cpne1Q8C166 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.14■□□□□ 0.81
Cpne1Q8C166 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cpne1Q8C166 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Cpne1Q8C166 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cpne1Q8C166 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cpne1Q8C166 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Cpne1Q8C166 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Cpne1Q8C166 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cpne1Q8C166 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cpne1Q8C166 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cpne1Q8C166 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cpne1Q8C166 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cpne1Q8C166 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cpne1Q8C166 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.13■□□□□ 0.81
Cpne1Q8C166 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cpne1Q8C166 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cpne1Q8C166 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Cpne1Q8C166 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cpne1Q8C166 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cpne1Q8C166 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cpne1Q8C166 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cpne1Q8C166 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Cpne1Q8C166 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cpne1Q8C166 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cpne1Q8C166 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.11■□□□□ 0.81
Cpne1Q8C166 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cpne1Q8C166 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.11■□□□□ 0.81
Cpne1Q8C166 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.11■□□□□ 0.81
Cpne1Q8C166 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Cpne1Q8C166 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cpne1Q8C166 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cpne1Q8C166 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Cpne1Q8C166 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cpne1Q8C166 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cpne1Q8C166 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Cpne1Q8C166 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cpne1Q8C166 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cpne1Q8C166 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Cpne1Q8C166 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cpne1Q8C166 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cpne1Q8C166 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cpne1Q8C166 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cpne1Q8C166 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Cpne1Q8C166 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cpne1Q8C166 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cpne1Q8C166 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cpne1Q8C166 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cpne1Q8C166 Gm22567-201ENSMUST00000175542 342 ntBASIC20.08■□□□□ 0.81
Cpne1Q8C166 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cpne1Q8C166 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cpne1Q8C166 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Cpne1Q8C166 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.07■□□□□ 0.8
Cpne1Q8C166 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cpne1Q8C166 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cpne1Q8C166 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cpne1Q8C166 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Cpne1Q8C166 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Cpne1Q8C166 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cpne1Q8C166 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.06■□□□□ 0.8
Cpne1Q8C166 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
Cpne1Q8C166 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cpne1Q8C166 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cpne1Q8C166 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpne1Q8C166 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpne1Q8C166 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Cpne1Q8C166 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Cpne1Q8C166 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Cpne1Q8C166 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpne1Q8C166 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cpne1Q8C166 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpne1Q8C166 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpne1Q8C166 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cpne1Q8C166 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpne1Q8C166 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpne1Q8C166 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Cpne1Q8C166 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.04■□□□□ 0.8
Cpne1Q8C166 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpne1Q8C166 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpne1Q8C166 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpne1Q8C166 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.03■□□□□ 0.8
Cpne1Q8C166 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpne1Q8C166 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 109.3 ms