Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sh3rf3Q8C120 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sh3rf3Q8C120 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sh3rf3Q8C120 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sh3rf3Q8C120 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Sh3rf3Q8C120 Cap2-205ENSMUST00000225824 1634 ntBASIC22.51■■□□□ 1.19
Sh3rf3Q8C120 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sh3rf3Q8C120 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC22.51■■□□□ 1.19
Sh3rf3Q8C120 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sh3rf3Q8C120 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3rf3Q8C120 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC22.5■■□□□ 1.19
Sh3rf3Q8C120 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3rf3Q8C120 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3rf3Q8C120 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3rf3Q8C120 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Sh3rf3Q8C120 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3rf3Q8C120 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3rf3Q8C120 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3rf3Q8C120 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3rf3Q8C120 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Sh3rf3Q8C120 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sh3rf3Q8C120 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sh3rf3Q8C120 Gm22567-201ENSMUST00000175542 342 ntBASIC22.49■■□□□ 1.19
Sh3rf3Q8C120 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.49■■□□□ 1.19
Sh3rf3Q8C120 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sh3rf3Q8C120 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sh3rf3Q8C120 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sh3rf3Q8C120 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Sh3rf3Q8C120 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Sh3rf3Q8C120 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Sh3rf3Q8C120 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sh3rf3Q8C120 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sh3rf3Q8C120 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Sh3rf3Q8C120 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sh3rf3Q8C120 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sh3rf3Q8C120 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sh3rf3Q8C120 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Sh3rf3Q8C120 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sh3rf3Q8C120 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Sh3rf3Q8C120 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sh3rf3Q8C120 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sh3rf3Q8C120 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sh3rf3Q8C120 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sh3rf3Q8C120 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sh3rf3Q8C120 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Sh3rf3Q8C120 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Sh3rf3Q8C120 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sh3rf3Q8C120 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.45■■□□□ 1.18
Sh3rf3Q8C120 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sh3rf3Q8C120 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Sh3rf3Q8C120 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sh3rf3Q8C120 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sh3rf3Q8C120 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sh3rf3Q8C120 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
Sh3rf3Q8C120 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sh3rf3Q8C120 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Sh3rf3Q8C120 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Sh3rf3Q8C120 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sh3rf3Q8C120 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sh3rf3Q8C120 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Sh3rf3Q8C120 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sh3rf3Q8C120 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.43■■□□□ 1.18
Sh3rf3Q8C120 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sh3rf3Q8C120 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sh3rf3Q8C120 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sh3rf3Q8C120 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sh3rf3Q8C120 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Sh3rf3Q8C120 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Sh3rf3Q8C120 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
Sh3rf3Q8C120 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sh3rf3Q8C120 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sh3rf3Q8C120 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sh3rf3Q8C120 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sh3rf3Q8C120 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sh3rf3Q8C120 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sh3rf3Q8C120 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Sh3rf3Q8C120 Gm38160-201ENSMUST00000193090 2499 ntBASIC22.4■■□□□ 1.18
Sh3rf3Q8C120 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sh3rf3Q8C120 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sh3rf3Q8C120 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.4■■□□□ 1.18
Sh3rf3Q8C120 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sh3rf3Q8C120 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Sh3rf3Q8C120 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Sh3rf3Q8C120 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sh3rf3Q8C120 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sh3rf3Q8C120 Gm13042-201ENSMUST00000119244 1955 ntBASIC22.39■■□□□ 1.17
Sh3rf3Q8C120 AC153962.1-201ENSMUST00000218530 1948 ntBASIC22.39■■□□□ 1.17
Sh3rf3Q8C120 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Sh3rf3Q8C120 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3rf3Q8C120 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3rf3Q8C120 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3rf3Q8C120 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3rf3Q8C120 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3rf3Q8C120 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3rf3Q8C120 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Sh3rf3Q8C120 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3rf3Q8C120 Gm10420-201ENSMUST00000121713 882 ntBASIC22.38■■□□□ 1.17
Sh3rf3Q8C120 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3rf3Q8C120 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3rf3Q8C120 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.38■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 143 ms