Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Scfd1Q8BRF7 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Scfd1Q8BRF7 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC24.97■■□□□ 1.59
Scfd1Q8BRF7 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Scfd1Q8BRF7 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Scfd1Q8BRF7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Scfd1Q8BRF7 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Scfd1Q8BRF7 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Scfd1Q8BRF7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC24.96■■□□□ 1.59
Scfd1Q8BRF7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC24.96■■□□□ 1.59
Scfd1Q8BRF7 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Scfd1Q8BRF7 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Scfd1Q8BRF7 Gm11847-201ENSMUST00000125165 1119 ntBASIC24.95■■□□□ 1.58
Scfd1Q8BRF7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
Scfd1Q8BRF7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Scfd1Q8BRF7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC24.95■■□□□ 1.58
Scfd1Q8BRF7 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Scfd1Q8BRF7 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
Scfd1Q8BRF7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC24.94■■□□□ 1.58
Scfd1Q8BRF7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC24.94■■□□□ 1.58
Scfd1Q8BRF7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC24.94■■□□□ 1.58
Scfd1Q8BRF7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Scfd1Q8BRF7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Scfd1Q8BRF7 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Scfd1Q8BRF7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Scfd1Q8BRF7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Scfd1Q8BRF7 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC24.93■■□□□ 1.58
Scfd1Q8BRF7 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Scfd1Q8BRF7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
Scfd1Q8BRF7 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
Scfd1Q8BRF7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Scfd1Q8BRF7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Scfd1Q8BRF7 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC24.92■■□□□ 1.58
Scfd1Q8BRF7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC24.92■■□□□ 1.58
Scfd1Q8BRF7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Scfd1Q8BRF7 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
Scfd1Q8BRF7 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Scfd1Q8BRF7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Scfd1Q8BRF7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Scfd1Q8BRF7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Scfd1Q8BRF7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC24.91■■□□□ 1.58
Scfd1Q8BRF7 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Scfd1Q8BRF7 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Scfd1Q8BRF7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Scfd1Q8BRF7 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Scfd1Q8BRF7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Scfd1Q8BRF7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Scfd1Q8BRF7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC24.9■■□□□ 1.58
Scfd1Q8BRF7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC24.89■■□□□ 1.58
Scfd1Q8BRF7 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Scfd1Q8BRF7 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Scfd1Q8BRF7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC24.89■■□□□ 1.58
Scfd1Q8BRF7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Scfd1Q8BRF7 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC24.89■■□□□ 1.57
Scfd1Q8BRF7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Scfd1Q8BRF7 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Scfd1Q8BRF7 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Scfd1Q8BRF7 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Scfd1Q8BRF7 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Scfd1Q8BRF7 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
Scfd1Q8BRF7 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC24.87■■□□□ 1.57
Scfd1Q8BRF7 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Scfd1Q8BRF7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Scfd1Q8BRF7 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Scfd1Q8BRF7 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Scfd1Q8BRF7 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Scfd1Q8BRF7 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Scfd1Q8BRF7 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Scfd1Q8BRF7 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
Scfd1Q8BRF7 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.86■■□□□ 1.57
Scfd1Q8BRF7 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Scfd1Q8BRF7 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC24.85■■□□□ 1.57
Scfd1Q8BRF7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Scfd1Q8BRF7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC24.85■■□□□ 1.57
Scfd1Q8BRF7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC24.85■■□□□ 1.57
Scfd1Q8BRF7 Gm8093-201ENSMUST00000128935 1892 ntBASIC24.85■■□□□ 1.57
Scfd1Q8BRF7 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Scfd1Q8BRF7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Scfd1Q8BRF7 Gm7417-201ENSMUST00000192950 473 ntBASIC24.84■■□□□ 1.57
Scfd1Q8BRF7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC24.84■■□□□ 1.57
Scfd1Q8BRF7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
Scfd1Q8BRF7 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Scfd1Q8BRF7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Scfd1Q8BRF7 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC24.83■■□□□ 1.57
Scfd1Q8BRF7 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Scfd1Q8BRF7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC24.83■■□□□ 1.57
Scfd1Q8BRF7 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC24.83■■□□□ 1.57
Scfd1Q8BRF7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC24.83■■□□□ 1.57
Scfd1Q8BRF7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC24.83■■□□□ 1.57
Scfd1Q8BRF7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC24.83■■□□□ 1.57
Scfd1Q8BRF7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
Scfd1Q8BRF7 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Scfd1Q8BRF7 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Scfd1Q8BRF7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
Scfd1Q8BRF7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC24.82■■□□□ 1.56
Scfd1Q8BRF7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC24.82■■□□□ 1.56
Scfd1Q8BRF7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Scfd1Q8BRF7 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Scfd1Q8BRF7 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Scfd1Q8BRF7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms