Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clrn3Q8BHH8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Clrn3Q8BHH8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.17■□□□□ 0.82
Clrn3Q8BHH8 Gm22567-201ENSMUST00000175542 342 ntBASIC20.17■□□□□ 0.82
Clrn3Q8BHH8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Clrn3Q8BHH8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Clrn3Q8BHH8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clrn3Q8BHH8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Clrn3Q8BHH8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clrn3Q8BHH8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clrn3Q8BHH8 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clrn3Q8BHH8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clrn3Q8BHH8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Clrn3Q8BHH8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clrn3Q8BHH8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Clrn3Q8BHH8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clrn3Q8BHH8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Clrn3Q8BHH8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clrn3Q8BHH8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Clrn3Q8BHH8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clrn3Q8BHH8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clrn3Q8BHH8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clrn3Q8BHH8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Clrn3Q8BHH8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.15■□□□□ 0.82
Clrn3Q8BHH8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.15■□□□□ 0.82
Clrn3Q8BHH8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clrn3Q8BHH8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Clrn3Q8BHH8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.15■□□□□ 0.82
Clrn3Q8BHH8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clrn3Q8BHH8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.15■□□□□ 0.82
Clrn3Q8BHH8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Clrn3Q8BHH8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Clrn3Q8BHH8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.14■□□□□ 0.81
Clrn3Q8BHH8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clrn3Q8BHH8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Clrn3Q8BHH8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.14■□□□□ 0.81
Clrn3Q8BHH8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clrn3Q8BHH8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Clrn3Q8BHH8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.14■□□□□ 0.81
Clrn3Q8BHH8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Clrn3Q8BHH8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clrn3Q8BHH8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clrn3Q8BHH8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.13■□□□□ 0.81
Clrn3Q8BHH8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clrn3Q8BHH8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clrn3Q8BHH8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clrn3Q8BHH8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Clrn3Q8BHH8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Clrn3Q8BHH8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.12■□□□□ 0.81
Clrn3Q8BHH8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Clrn3Q8BHH8 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Clrn3Q8BHH8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clrn3Q8BHH8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.1■□□□□ 0.81
Clrn3Q8BHH8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clrn3Q8BHH8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.1■□□□□ 0.81
Clrn3Q8BHH8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Clrn3Q8BHH8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Clrn3Q8BHH8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clrn3Q8BHH8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clrn3Q8BHH8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Clrn3Q8BHH8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clrn3Q8BHH8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clrn3Q8BHH8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.09■□□□□ 0.81
Clrn3Q8BHH8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clrn3Q8BHH8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Clrn3Q8BHH8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Clrn3Q8BHH8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Clrn3Q8BHH8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Clrn3Q8BHH8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
Clrn3Q8BHH8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clrn3Q8BHH8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Clrn3Q8BHH8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clrn3Q8BHH8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clrn3Q8BHH8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.8
Clrn3Q8BHH8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clrn3Q8BHH8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clrn3Q8BHH8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Clrn3Q8BHH8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clrn3Q8BHH8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clrn3Q8BHH8 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Clrn3Q8BHH8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clrn3Q8BHH8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.06■□□□□ 0.8
Clrn3Q8BHH8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clrn3Q8BHH8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clrn3Q8BHH8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Clrn3Q8BHH8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.06■□□□□ 0.8
Clrn3Q8BHH8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clrn3Q8BHH8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Clrn3Q8BHH8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Clrn3Q8BHH8 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clrn3Q8BHH8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clrn3Q8BHH8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Clrn3Q8BHH8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clrn3Q8BHH8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Clrn3Q8BHH8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clrn3Q8BHH8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clrn3Q8BHH8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clrn3Q8BHH8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Clrn3Q8BHH8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Clrn3Q8BHH8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms