Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Atg4bQ8BGE6 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Atg4bQ8BGE6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atg4bQ8BGE6 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atg4bQ8BGE6 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atg4bQ8BGE6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atg4bQ8BGE6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.38■□□□□ 0.85
Atg4bQ8BGE6 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atg4bQ8BGE6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atg4bQ8BGE6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atg4bQ8BGE6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atg4bQ8BGE6 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atg4bQ8BGE6 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.38■□□□□ 0.85
Atg4bQ8BGE6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Atg4bQ8BGE6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Atg4bQ8BGE6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.37■□□□□ 0.85
Atg4bQ8BGE6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Atg4bQ8BGE6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Atg4bQ8BGE6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Atg4bQ8BGE6 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Atg4bQ8BGE6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atg4bQ8BGE6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Atg4bQ8BGE6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Atg4bQ8BGE6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Atg4bQ8BGE6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Atg4bQ8BGE6 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atg4bQ8BGE6 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atg4bQ8BGE6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atg4bQ8BGE6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atg4bQ8BGE6 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atg4bQ8BGE6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.35■□□□□ 0.85
Atg4bQ8BGE6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atg4bQ8BGE6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Atg4bQ8BGE6 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Atg4bQ8BGE6 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Atg4bQ8BGE6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atg4bQ8BGE6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atg4bQ8BGE6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Atg4bQ8BGE6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Atg4bQ8BGE6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atg4bQ8BGE6 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atg4bQ8BGE6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atg4bQ8BGE6 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Atg4bQ8BGE6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Atg4bQ8BGE6 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atg4bQ8BGE6 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Atg4bQ8BGE6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atg4bQ8BGE6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Atg4bQ8BGE6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Atg4bQ8BGE6 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Atg4bQ8BGE6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atg4bQ8BGE6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atg4bQ8BGE6 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Atg4bQ8BGE6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atg4bQ8BGE6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atg4bQ8BGE6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.31■□□□□ 0.84
Atg4bQ8BGE6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.31■□□□□ 0.84
Atg4bQ8BGE6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Atg4bQ8BGE6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.31■□□□□ 0.84
Atg4bQ8BGE6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atg4bQ8BGE6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atg4bQ8BGE6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atg4bQ8BGE6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Atg4bQ8BGE6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.3■□□□□ 0.84
Atg4bQ8BGE6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atg4bQ8BGE6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atg4bQ8BGE6 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atg4bQ8BGE6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atg4bQ8BGE6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Atg4bQ8BGE6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atg4bQ8BGE6 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.29■□□□□ 0.84
Atg4bQ8BGE6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atg4bQ8BGE6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Atg4bQ8BGE6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.28■□□□□ 0.84
Atg4bQ8BGE6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Atg4bQ8BGE6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.28■□□□□ 0.84
Atg4bQ8BGE6 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atg4bQ8BGE6 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atg4bQ8BGE6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Atg4bQ8BGE6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atg4bQ8BGE6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.28■□□□□ 0.84
Atg4bQ8BGE6 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Atg4bQ8BGE6 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.28■□□□□ 0.84
Atg4bQ8BGE6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atg4bQ8BGE6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atg4bQ8BGE6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atg4bQ8BGE6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atg4bQ8BGE6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atg4bQ8BGE6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Atg4bQ8BGE6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Atg4bQ8BGE6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Atg4bQ8BGE6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atg4bQ8BGE6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.26■□□□□ 0.83
Atg4bQ8BGE6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Atg4bQ8BGE6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atg4bQ8BGE6 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Atg4bQ8BGE6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.25■□□□□ 0.83
Atg4bQ8BGE6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atg4bQ8BGE6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atg4bQ8BGE6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms