Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx4Q7TNK1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx4Q7TNK1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx4Q7TNK1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx4Q7TNK1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx4Q7TNK1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx4Q7TNK1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx4Q7TNK1 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.68■□□□□ 0.9
Rfx4Q7TNK1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx4Q7TNK1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
Rfx4Q7TNK1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Rfx4Q7TNK1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.67■□□□□ 0.9
Rfx4Q7TNK1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Rfx4Q7TNK1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx4Q7TNK1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Rfx4Q7TNK1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx4Q7TNK1 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.66■□□□□ 0.9
Rfx4Q7TNK1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx4Q7TNK1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx4Q7TNK1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx4Q7TNK1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx4Q7TNK1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rfx4Q7TNK1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rfx4Q7TNK1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx4Q7TNK1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx4Q7TNK1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx4Q7TNK1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx4Q7TNK1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx4Q7TNK1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.65■□□□□ 0.9
Rfx4Q7TNK1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.65■□□□□ 0.9
Rfx4Q7TNK1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx4Q7TNK1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Rfx4Q7TNK1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx4Q7TNK1 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.64■□□□□ 0.9
Rfx4Q7TNK1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rfx4Q7TNK1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rfx4Q7TNK1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rfx4Q7TNK1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfx4Q7TNK1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rfx4Q7TNK1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rfx4Q7TNK1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Rfx4Q7TNK1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Rfx4Q7TNK1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfx4Q7TNK1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Rfx4Q7TNK1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx4Q7TNK1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx4Q7TNK1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.63■□□□□ 0.89
Rfx4Q7TNK1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Rfx4Q7TNK1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx4Q7TNK1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Rfx4Q7TNK1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx4Q7TNK1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx4Q7TNK1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.62■□□□□ 0.89
Rfx4Q7TNK1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx4Q7TNK1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx4Q7TNK1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Rfx4Q7TNK1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfx4Q7TNK1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfx4Q7TNK1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rfx4Q7TNK1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.61■□□□□ 0.89
Rfx4Q7TNK1 Gm9812-201ENSMUST00000061934 968 ntBASIC20.61■□□□□ 0.89
Rfx4Q7TNK1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfx4Q7TNK1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfx4Q7TNK1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Rfx4Q7TNK1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Rfx4Q7TNK1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.6■□□□□ 0.89
Rfx4Q7TNK1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx4Q7TNK1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.6■□□□□ 0.89
Rfx4Q7TNK1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx4Q7TNK1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx4Q7TNK1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx4Q7TNK1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfx4Q7TNK1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfx4Q7TNK1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfx4Q7TNK1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfx4Q7TNK1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Rfx4Q7TNK1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rfx4Q7TNK1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rfx4Q7TNK1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.59■□□□□ 0.89
Rfx4Q7TNK1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.59■□□□□ 0.89
Rfx4Q7TNK1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.59■□□□□ 0.89
Rfx4Q7TNK1 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.59■□□□□ 0.89
Rfx4Q7TNK1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfx4Q7TNK1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rfx4Q7TNK1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rfx4Q7TNK1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rfx4Q7TNK1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rfx4Q7TNK1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rfx4Q7TNK1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx4Q7TNK1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx4Q7TNK1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Rfx4Q7TNK1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Rfx4Q7TNK1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx4Q7TNK1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Rfx4Q7TNK1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.57■□□□□ 0.88
Rfx4Q7TNK1 Notumos-201ENSMUST00000151998 2659 ntBASIC20.57■□□□□ 0.88
Rfx4Q7TNK1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx4Q7TNK1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.56■□□□□ 0.88
Rfx4Q7TNK1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.56■□□□□ 0.88
Rfx4Q7TNK1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms