Protein–RNA interactions for Protein: Q6PHN9

Rab35, Ras-related protein Rab-35, mousemouse

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab35Q6PHN9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rab35Q6PHN9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rab35Q6PHN9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rab35Q6PHN9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
Rab35Q6PHN9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rab35Q6PHN9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rab35Q6PHN9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Rab35Q6PHN9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rab35Q6PHN9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rab35Q6PHN9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Rab35Q6PHN9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rab35Q6PHN9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rab35Q6PHN9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rab35Q6PHN9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rab35Q6PHN9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rab35Q6PHN9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rab35Q6PHN9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rab35Q6PHN9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rab35Q6PHN9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rab35Q6PHN9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Rab35Q6PHN9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rab35Q6PHN9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab35Q6PHN9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab35Q6PHN9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab35Q6PHN9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
Rab35Q6PHN9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Rab35Q6PHN9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.93■□□□□ 0.62
Rab35Q6PHN9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab35Q6PHN9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab35Q6PHN9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab35Q6PHN9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab35Q6PHN9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab35Q6PHN9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab35Q6PHN9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Rab35Q6PHN9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab35Q6PHN9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab35Q6PHN9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab35Q6PHN9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Rab35Q6PHN9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab35Q6PHN9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Rab35Q6PHN9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rab35Q6PHN9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rab35Q6PHN9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rab35Q6PHN9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.91■□□□□ 0.62
Rab35Q6PHN9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rab35Q6PHN9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rab35Q6PHN9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.9■□□□□ 0.62
Rab35Q6PHN9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Rab35Q6PHN9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab35Q6PHN9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab35Q6PHN9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab35Q6PHN9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab35Q6PHN9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab35Q6PHN9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab35Q6PHN9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab35Q6PHN9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rab35Q6PHN9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab35Q6PHN9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab35Q6PHN9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.89■□□□□ 0.61
Rab35Q6PHN9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Rab35Q6PHN9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab35Q6PHN9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab35Q6PHN9 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rab35Q6PHN9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab35Q6PHN9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Rab35Q6PHN9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab35Q6PHN9 Gm5812-201ENSMUST00000061073 957 ntBASIC18.88■□□□□ 0.61
Rab35Q6PHN9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.88■□□□□ 0.61
Rab35Q6PHN9 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab35Q6PHN9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab35Q6PHN9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rab35Q6PHN9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab35Q6PHN9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab35Q6PHN9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab35Q6PHN9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
Rab35Q6PHN9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab35Q6PHN9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Rab35Q6PHN9 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab35Q6PHN9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rab35Q6PHN9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rab35Q6PHN9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Rab35Q6PHN9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rab35Q6PHN9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab35Q6PHN9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rab35Q6PHN9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rab35Q6PHN9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab35Q6PHN9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab35Q6PHN9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab35Q6PHN9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Rab35Q6PHN9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab35Q6PHN9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab35Q6PHN9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.85■□□□□ 0.61
Rab35Q6PHN9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab35Q6PHN9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab35Q6PHN9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rab35Q6PHN9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rab35Q6PHN9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab35Q6PHN9 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.84■□□□□ 0.61
Rab35Q6PHN9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Rab35Q6PHN9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms