Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Abcf1Q6P542 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Abcf1Q6P542 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Abcf1Q6P542 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Abcf1Q6P542 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Abcf1Q6P542 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Abcf1Q6P542 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
Abcf1Q6P542 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC24.04■■□□□ 1.44
Abcf1Q6P542 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Abcf1Q6P542 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Abcf1Q6P542 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Abcf1Q6P542 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Abcf1Q6P542 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Abcf1Q6P542 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Abcf1Q6P542 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Abcf1Q6P542 Terc-201ENSMUST00000082862 423 ntBASIC24.03■■□□□ 1.44
Abcf1Q6P542 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Abcf1Q6P542 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Abcf1Q6P542 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Abcf1Q6P542 AC153524.1-201ENSMUST00000220436 1935 ntBASIC24.02■■□□□ 1.44
Abcf1Q6P542 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Abcf1Q6P542 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Abcf1Q6P542 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC24.02■■□□□ 1.44
Abcf1Q6P542 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Abcf1Q6P542 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Abcf1Q6P542 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
Abcf1Q6P542 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Abcf1Q6P542 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC24.01■■□□□ 1.43
Abcf1Q6P542 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Abcf1Q6P542 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Abcf1Q6P542 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Abcf1Q6P542 AC124392.1-201ENSMUST00000225172 5324 ntBASIC24.01■■□□□ 1.43
Abcf1Q6P542 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC24.01■■□□□ 1.43
Abcf1Q6P542 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Abcf1Q6P542 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Abcf1Q6P542 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Abcf1Q6P542 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Abcf1Q6P542 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Abcf1Q6P542 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Abcf1Q6P542 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Abcf1Q6P542 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Abcf1Q6P542 AC115037.1-201ENSMUST00000223391 2173 ntBASIC23.99■■□□□ 1.43
Abcf1Q6P542 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Abcf1Q6P542 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.99■■□□□ 1.43
Abcf1Q6P542 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Abcf1Q6P542 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Abcf1Q6P542 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Abcf1Q6P542 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Abcf1Q6P542 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.98■■□□□ 1.43
Abcf1Q6P542 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Abcf1Q6P542 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Abcf1Q6P542 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Abcf1Q6P542 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Abcf1Q6P542 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Abcf1Q6P542 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC23.98■■□□□ 1.43
Abcf1Q6P542 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
Abcf1Q6P542 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Abcf1Q6P542 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Abcf1Q6P542 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Abcf1Q6P542 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Abcf1Q6P542 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Abcf1Q6P542 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.96■■□□□ 1.43
Abcf1Q6P542 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Abcf1Q6P542 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.96■■□□□ 1.43
Abcf1Q6P542 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Abcf1Q6P542 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Abcf1Q6P542 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Abcf1Q6P542 Gm43006-201ENSMUST00000197702 1602 ntBASIC23.95■■□□□ 1.43
Abcf1Q6P542 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC23.95■■□□□ 1.43
Abcf1Q6P542 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Abcf1Q6P542 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Abcf1Q6P542 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.95■■□□□ 1.42
Abcf1Q6P542 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Abcf1Q6P542 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC23.95■■□□□ 1.42
Abcf1Q6P542 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Abcf1Q6P542 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Abcf1Q6P542 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.94■■□□□ 1.42
Abcf1Q6P542 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Abcf1Q6P542 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC23.93■■□□□ 1.42
Abcf1Q6P542 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Abcf1Q6P542 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Abcf1Q6P542 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC23.93■■□□□ 1.42
Abcf1Q6P542 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC23.93■■□□□ 1.42
Abcf1Q6P542 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Abcf1Q6P542 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Abcf1Q6P542 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
Abcf1Q6P542 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.92■■□□□ 1.42
Abcf1Q6P542 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Abcf1Q6P542 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Abcf1Q6P542 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Abcf1Q6P542 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Abcf1Q6P542 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Abcf1Q6P542 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Abcf1Q6P542 Cap2-205ENSMUST00000225824 1634 ntBASIC23.91■■□□□ 1.42
Abcf1Q6P542 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Abcf1Q6P542 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Abcf1Q6P542 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Abcf1Q6P542 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Abcf1Q6P542 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.9■■□□□ 1.42
Abcf1Q6P542 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 166.6 ms