Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VclQ64727 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VclQ64727 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
VclQ64727 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
VclQ64727 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VclQ64727 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.19■□□□□ 0.98
VclQ64727 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.19■□□□□ 0.98
VclQ64727 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VclQ64727 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VclQ64727 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
VclQ64727 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
VclQ64727 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VclQ64727 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VclQ64727 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
VclQ64727 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
VclQ64727 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VclQ64727 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VclQ64727 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VclQ64727 Gm22567-201ENSMUST00000175542 342 ntBASIC21.17■□□□□ 0.98
VclQ64727 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VclQ64727 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VclQ64727 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VclQ64727 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VclQ64727 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
VclQ64727 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VclQ64727 Gm43566-201ENSMUST00000196851 808 ntBASIC21.16■□□□□ 0.98
VclQ64727 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
VclQ64727 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
VclQ64727 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
VclQ64727 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VclQ64727 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
VclQ64727 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.15■□□□□ 0.98
VclQ64727 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
VclQ64727 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
VclQ64727 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
VclQ64727 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
VclQ64727 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.14■□□□□ 0.97
VclQ64727 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VclQ64727 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
VclQ64727 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VclQ64727 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VclQ64727 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.13■□□□□ 0.97
VclQ64727 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.13■□□□□ 0.97
VclQ64727 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
VclQ64727 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VclQ64727 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.13■□□□□ 0.97
VclQ64727 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.12■□□□□ 0.97
VclQ64727 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VclQ64727 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VclQ64727 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VclQ64727 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VclQ64727 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VclQ64727 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VclQ64727 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VclQ64727 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VclQ64727 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VclQ64727 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VclQ64727 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
VclQ64727 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VclQ64727 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VclQ64727 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VclQ64727 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
VclQ64727 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
VclQ64727 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VclQ64727 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.1■□□□□ 0.97
VclQ64727 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.1■□□□□ 0.97
VclQ64727 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
VclQ64727 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VclQ64727 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VclQ64727 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VclQ64727 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
VclQ64727 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
VclQ64727 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VclQ64727 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VclQ64727 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
VclQ64727 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VclQ64727 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VclQ64727 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
VclQ64727 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.08■□□□□ 0.97
VclQ64727 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
VclQ64727 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.08■□□□□ 0.96
VclQ64727 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
VclQ64727 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
VclQ64727 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
VclQ64727 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
VclQ64727 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
VclQ64727 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VclQ64727 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
VclQ64727 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
VclQ64727 Gm5812-201ENSMUST00000061073 957 ntBASIC21.07■□□□□ 0.96
VclQ64727 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VclQ64727 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VclQ64727 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
VclQ64727 Gm13238-201ENSMUST00000117655 780 ntBASIC21.06■□□□□ 0.96
VclQ64727 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VclQ64727 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VclQ64727 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
VclQ64727 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VclQ64727 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VclQ64727 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms