Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sox17Q61473 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Sox17Q61473 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sox17Q61473 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sox17Q61473 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sox17Q61473 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Sox17Q61473 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sox17Q61473 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sox17Q61473 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sox17Q61473 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sox17Q61473 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sox17Q61473 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sox17Q61473 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Sox17Q61473 Gm22567-201ENSMUST00000175542 342 ntBASIC20.21■□□□□ 0.83
Sox17Q61473 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sox17Q61473 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.21■□□□□ 0.83
Sox17Q61473 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Sox17Q61473 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sox17Q61473 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.2■□□□□ 0.82
Sox17Q61473 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sox17Q61473 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sox17Q61473 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sox17Q61473 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sox17Q61473 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sox17Q61473 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sox17Q61473 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Sox17Q61473 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.2■□□□□ 0.82
Sox17Q61473 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sox17Q61473 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sox17Q61473 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sox17Q61473 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.19■□□□□ 0.82
Sox17Q61473 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sox17Q61473 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sox17Q61473 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sox17Q61473 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sox17Q61473 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sox17Q61473 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Sox17Q61473 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.18■□□□□ 0.82
Sox17Q61473 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sox17Q61473 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.18■□□□□ 0.82
Sox17Q61473 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sox17Q61473 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sox17Q61473 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sox17Q61473 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sox17Q61473 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sox17Q61473 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sox17Q61473 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sox17Q61473 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sox17Q61473 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sox17Q61473 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sox17Q61473 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sox17Q61473 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sox17Q61473 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sox17Q61473 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sox17Q61473 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sox17Q61473 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sox17Q61473 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.15■□□□□ 0.82
Sox17Q61473 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sox17Q61473 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sox17Q61473 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Sox17Q61473 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sox17Q61473 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sox17Q61473 Gm4799-201ENSMUST00000095396 657 ntBASIC20.14■□□□□ 0.81
Sox17Q61473 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sox17Q61473 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sox17Q61473 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sox17Q61473 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sox17Q61473 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sox17Q61473 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sox17Q61473 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sox17Q61473 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
Sox17Q61473 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sox17Q61473 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.13■□□□□ 0.81
Sox17Q61473 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sox17Q61473 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.13■□□□□ 0.81
Sox17Q61473 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sox17Q61473 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sox17Q61473 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sox17Q61473 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sox17Q61473 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.12■□□□□ 0.81
Sox17Q61473 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.12■□□□□ 0.81
Sox17Q61473 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sox17Q61473 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sox17Q61473 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Sox17Q61473 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sox17Q61473 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sox17Q61473 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sox17Q61473 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sox17Q61473 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sox17Q61473 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.11■□□□□ 0.81
Sox17Q61473 Gm9812-201ENSMUST00000061934 968 ntBASIC20.11■□□□□ 0.81
Sox17Q61473 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sox17Q61473 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Sox17Q61473 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.11■□□□□ 0.81
Sox17Q61473 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Sox17Q61473 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sox17Q61473 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sox17Q61473 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.1■□□□□ 0.81
Sox17Q61473 Gm6821-201ENSMUST00000107540 542 ntBASIC20.1■□□□□ 0.81
Sox17Q61473 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms