Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Foxf1Q61080 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Foxf1Q61080 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Foxf1Q61080 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Foxf1Q61080 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Foxf1Q61080 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Foxf1Q61080 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Foxf1Q61080 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Foxf1Q61080 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.09■□□□□ 0.49
Foxf1Q61080 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Foxf1Q61080 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Foxf1Q61080 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Foxf1Q61080 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Foxf1Q61080 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.08■□□□□ 0.48
Foxf1Q61080 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.08■□□□□ 0.48
Foxf1Q61080 Gm27502-201ENSMUST00000183495 199 ntBASIC18.08■□□□□ 0.48
Foxf1Q61080 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Foxf1Q61080 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Foxf1Q61080 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Foxf1Q61080 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Foxf1Q61080 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Foxf1Q61080 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Foxf1Q61080 Gm22567-201ENSMUST00000175542 342 ntBASIC18.07■□□□□ 0.48
Foxf1Q61080 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Foxf1Q61080 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Foxf1Q61080 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Foxf1Q61080 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Foxf1Q61080 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Foxf1Q61080 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Foxf1Q61080 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Foxf1Q61080 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Foxf1Q61080 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.06■□□□□ 0.48
Foxf1Q61080 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Foxf1Q61080 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Foxf1Q61080 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Foxf1Q61080 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Foxf1Q61080 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.05■□□□□ 0.48
Foxf1Q61080 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.05■□□□□ 0.48
Foxf1Q61080 Gm7332-201ENSMUST00000118351 454 ntBASIC18.05■□□□□ 0.48
Foxf1Q61080 Gm12366-201ENSMUST00000121722 873 ntBASIC18.05■□□□□ 0.48
Foxf1Q61080 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.05■□□□□ 0.48
Foxf1Q61080 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.05■□□□□ 0.48
Foxf1Q61080 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Foxf1Q61080 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.05■□□□□ 0.48
Foxf1Q61080 Gm5786-201ENSMUST00000085368 882 ntBASIC18.05■□□□□ 0.48
Foxf1Q61080 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Foxf1Q61080 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Foxf1Q61080 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Foxf1Q61080 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Foxf1Q61080 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Foxf1Q61080 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Foxf1Q61080 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.04■□□□□ 0.48
Foxf1Q61080 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Foxf1Q61080 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Foxf1Q61080 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Foxf1Q61080 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Foxf1Q61080 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Foxf1Q61080 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Foxf1Q61080 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Foxf1Q61080 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Foxf1Q61080 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Foxf1Q61080 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.02■□□□□ 0.48
Foxf1Q61080 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Foxf1Q61080 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Foxf1Q61080 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Foxf1Q61080 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Foxf1Q61080 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Foxf1Q61080 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Foxf1Q61080 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Foxf1Q61080 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Foxf1Q61080 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Foxf1Q61080 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Foxf1Q61080 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.01■□□□□ 0.47
Foxf1Q61080 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Foxf1Q61080 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Foxf1Q61080 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Foxf1Q61080 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Foxf1Q61080 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Foxf1Q61080 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Foxf1Q61080 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18■□□□□ 0.47
Foxf1Q61080 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18■□□□□ 0.47
Foxf1Q61080 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18■□□□□ 0.47
Foxf1Q61080 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18■□□□□ 0.47
Foxf1Q61080 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Foxf1Q61080 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Foxf1Q61080 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Foxf1Q61080 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Foxf1Q61080 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Foxf1Q61080 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Foxf1Q61080 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.99■□□□□ 0.47
Foxf1Q61080 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.99■□□□□ 0.47
Foxf1Q61080 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Foxf1Q61080 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Foxf1Q61080 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.99■□□□□ 0.47
Foxf1Q61080 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Foxf1Q61080 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Foxf1Q61080 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Foxf1Q61080 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Foxf1Q61080 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Foxf1Q61080 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms