Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sim2Q61079 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sim2Q61079 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sim2Q61079 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sim2Q61079 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Sim2Q61079 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.28■■□□□ 1
Sim2Q61079 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sim2Q61079 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Sim2Q61079 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.27■■□□□ 1
Sim2Q61079 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sim2Q61079 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Sim2Q61079 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Sim2Q61079 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.26■□□□□ 0.99
Sim2Q61079 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.26■□□□□ 0.99
Sim2Q61079 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sim2Q61079 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.26■□□□□ 0.99
Sim2Q61079 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.26■□□□□ 0.99
Sim2Q61079 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.26■□□□□ 0.99
Sim2Q61079 Golgb1-201ENSMUST00000023534 498 ntBASIC21.26■□□□□ 0.99
Sim2Q61079 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sim2Q61079 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sim2Q61079 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sim2Q61079 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.25■□□□□ 0.99
Sim2Q61079 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.25■□□□□ 0.99
Sim2Q61079 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sim2Q61079 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sim2Q61079 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sim2Q61079 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sim2Q61079 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Sim2Q61079 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sim2Q61079 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sim2Q61079 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Sim2Q61079 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sim2Q61079 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sim2Q61079 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sim2Q61079 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
Sim2Q61079 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sim2Q61079 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sim2Q61079 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sim2Q61079 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.22■□□□□ 0.99
Sim2Q61079 Gm8495-201ENSMUST00000188740 694 ntBASIC21.22■□□□□ 0.99
Sim2Q61079 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sim2Q61079 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sim2Q61079 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.21■□□□□ 0.99
Sim2Q61079 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sim2Q61079 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.21■□□□□ 0.99
Sim2Q61079 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Sim2Q61079 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sim2Q61079 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.21■□□□□ 0.99
Sim2Q61079 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sim2Q61079 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.2■□□□□ 0.98
Sim2Q61079 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sim2Q61079 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.2■□□□□ 0.98
Sim2Q61079 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.2■□□□□ 0.98
Sim2Q61079 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sim2Q61079 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sim2Q61079 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sim2Q61079 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sim2Q61079 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sim2Q61079 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sim2Q61079 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Sim2Q61079 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.19■□□□□ 0.98
Sim2Q61079 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sim2Q61079 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sim2Q61079 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sim2Q61079 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.18■□□□□ 0.98
Sim2Q61079 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sim2Q61079 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.18■□□□□ 0.98
Sim2Q61079 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sim2Q61079 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Sim2Q61079 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sim2Q61079 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.18■□□□□ 0.98
Sim2Q61079 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sim2Q61079 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sim2Q61079 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sim2Q61079 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Sim2Q61079 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Sim2Q61079 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Sim2Q61079 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sim2Q61079 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sim2Q61079 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sim2Q61079 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Sim2Q61079 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sim2Q61079 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.16■□□□□ 0.98
Sim2Q61079 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sim2Q61079 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sim2Q61079 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Sim2Q61079 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sim2Q61079 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sim2Q61079 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sim2Q61079 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.15■□□□□ 0.98
Sim2Q61079 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sim2Q61079 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sim2Q61079 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sim2Q61079 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sim2Q61079 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.15■□□□□ 0.98
Sim2Q61079 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sim2Q61079 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sim2Q61079 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sim2Q61079 Gm18284-201ENSMUST00000172604 624 ntBASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms