Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Foxd3Q61060 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.69■□□□□ 0.74
Foxd3Q61060 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.69■□□□□ 0.74
Foxd3Q61060 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Foxd3Q61060 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Foxd3Q61060 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Foxd3Q61060 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Foxd3Q61060 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Foxd3Q61060 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Foxd3Q61060 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Foxd3Q61060 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.68■□□□□ 0.74
Foxd3Q61060 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Foxd3Q61060 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Foxd3Q61060 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.68■□□□□ 0.74
Foxd3Q61060 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Foxd3Q61060 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Foxd3Q61060 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Foxd3Q61060 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.67■□□□□ 0.74
Foxd3Q61060 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.67■□□□□ 0.74
Foxd3Q61060 Gm7332-201ENSMUST00000118351 454 ntBASIC19.67■□□□□ 0.74
Foxd3Q61060 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Foxd3Q61060 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Foxd3Q61060 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Foxd3Q61060 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Foxd3Q61060 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Foxd3Q61060 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Foxd3Q61060 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Foxd3Q61060 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Foxd3Q61060 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Foxd3Q61060 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Foxd3Q61060 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Foxd3Q61060 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.65■□□□□ 0.74
Foxd3Q61060 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Foxd3Q61060 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Foxd3Q61060 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Foxd3Q61060 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Foxd3Q61060 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Foxd3Q61060 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Foxd3Q61060 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Foxd3Q61060 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Foxd3Q61060 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Foxd3Q61060 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Foxd3Q61060 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Foxd3Q61060 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Foxd3Q61060 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Foxd3Q61060 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Foxd3Q61060 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Foxd3Q61060 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Foxd3Q61060 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Foxd3Q61060 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Foxd3Q61060 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Foxd3Q61060 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Foxd3Q61060 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Foxd3Q61060 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.62■□□□□ 0.73
Foxd3Q61060 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.62■□□□□ 0.73
Foxd3Q61060 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Foxd3Q61060 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Foxd3Q61060 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Foxd3Q61060 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Foxd3Q61060 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Foxd3Q61060 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Foxd3Q61060 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Foxd3Q61060 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Foxd3Q61060 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Foxd3Q61060 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Foxd3Q61060 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Foxd3Q61060 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Foxd3Q61060 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Foxd3Q61060 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Foxd3Q61060 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Foxd3Q61060 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Foxd3Q61060 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Foxd3Q61060 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Foxd3Q61060 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Foxd3Q61060 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.59■□□□□ 0.73
Foxd3Q61060 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Foxd3Q61060 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.59■□□□□ 0.73
Foxd3Q61060 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Foxd3Q61060 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Foxd3Q61060 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Foxd3Q61060 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Foxd3Q61060 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.59■□□□□ 0.73
Foxd3Q61060 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.58■□□□□ 0.73
Foxd3Q61060 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Foxd3Q61060 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Foxd3Q61060 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Foxd3Q61060 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Foxd3Q61060 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Foxd3Q61060 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Foxd3Q61060 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Foxd3Q61060 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Foxd3Q61060 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Foxd3Q61060 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Foxd3Q61060 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Foxd3Q61060 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Foxd3Q61060 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Foxd3Q61060 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Foxd3Q61060 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Foxd3Q61060 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Foxd3Q61060 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms